Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03794 ATGGTTATAGCAGCATGTAACAGAGTTGATCACTGTGTCCTCATAATCTCATGCCTCGGTTTCATCGTCACGCTCCGCCTCCTCCTCTCCCTCTCCACCTGGATCTTCCGAACCTGCTTCCGATCCGAGAAGAACCTCATCCGAACCTACGGTTCCTGGGCTCTGGTCACCGGAGCCACCGACGGCATCGGCAAGGCTTTCGCCTTCCAGCTGGCACAGCGAGGGCTCAACCTCATCCTCGTAAGCAGAACCTTGCAGAAGCTGGAAGCTGTTGCGCGTGAAATCAAGGCGAAGCATCCAAACGCGCGCGTGAAGGTGGTGGAGATAGACTTCGCGAGCGGGGATCTGTCGGAGGGTCTGCGGCGCATGGAGGAGGCGAGTGAGGGGTTGGATGTTGGCGTGTTGGTGAACAACGTGGGGATGACGTATCCGCATGCAATGTTTTTCGACGAAGTGGAGGAGAGTGTGTGGAGGAAGATCGTTAGAGTGAACGTGGAAGGAACAACGAAAGTAACGAAATGTGTTCTGCGTGGGATGTTGGAAAGGAGAAAGGGAGCCATCGTTAACATTGGCTCTGGTGCTGCACTCGTTCTGCCTTCTCATCCTCTCTTCACTGTCTATGCTGCCACCAAGGCTTACGTGGATCAATTCTCAAGATCTCTATACGTGGAGTATGGACAATATGGGATACATGTGCAATGTCAGGTACCACTGTACGTTGCAACAAATATGGTATCAAGGGTGGCTTGTATTCAGAGAGATTCGTTGTTTATACCCACAGCTGAGGCTTATGCAAGAGCTGCAATTGCTGAAATTGGGTTCCAAGCAAAGTGCATACCTTATTGGGCTCACTCTTTTCAGGGCTTCTTAGCACACTTAATCCCTCACCCTCTGCTTGATTCCTGGCGATTATCCATCGGTATTCGCCGCCGGAAGAATCAAAACCAATCCTCATTCACTTCAACTTTATCTCTATGA 978 0.5102 MVIAACNRVDHCVLIISCLGFIVTLRLLLSLSTWIFRTCFRSEKNLIRTYGSWALVTGATDGIGKAFAFQLAQRGLNLILVSRTLQKLEAVAREIKAKHPNARVKVVEIDFASGDLSEGLRRMEEASEGLDVGVLVNNVGMTYPHAMFFDEVEESVWRKIVRVNVEGTTKVTKCVLRGMLERRKGAIVNIGSGAALVLPSHPLFTVYAATKAYVDQFSRSLYVEYGQYGIHVQCQVPLYVATNMVSRVACIQRDSLFIPTAEAYARAAIAEIGFQAKCIPYWAHSFQGFLAHLIPHPLLDSWRLSIGIRRRKNQNQSSFTSTLSL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03794 325 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 193 IPR002347 -
Phac2g03794 325 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 141 IPR002347 -
Phac2g03794 325 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 207 226 IPR002347 -
Phac2g03794 325 FunFam Hydroxysteroid (17-beta) dehydrogenase 3 47 279 - -
Phac2g03794 325 PANTHER RH59310P 14 316 - -
Phac2g03794 325 Gene3D - 45 282 - -
Phac2g03794 325 PIRSF 11-beta-HSD1 3 317 - -
Phac2g03794 325 CDD 17beta-HSD1_like_SDR_c 51 295 - -
Phac2g03794 325 PRINTS Glucose/ribitol dehydrogenase family signature 207 226 IPR002347 -
Phac2g03794 325 PRINTS Glucose/ribitol dehydrogenase family signature 53 70 IPR002347 -
Phac2g03794 325 PRINTS Glucose/ribitol dehydrogenase family signature 179 195 IPR002347 -
Phac2g03794 325 PRINTS Glucose/ribitol dehydrogenase family signature 130 141 IPR002347 -
Phac2g03794 325 PRINTS Glucose/ribitol dehydrogenase family signature 228 245 IPR002347 -
Phac2g03794 325 Pfam short chain dehydrogenase 53 247 IPR002347 -
Phac2g03794 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 47 302 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03794 Phac-Chr2 38376013 38378970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03794 19 311 Lipid Metabolism Gene Families AT1G24470 57.143 5.13e-121 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03794 K10251 - rcu:8285440 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g03794 2 38376013 38378970 Phac2g03794 2 38376013 38378970 ECH