Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02857 ATGTTGATCAACCCTGTTGAGAGAAGAAAGCCATATCTTCTCCCTCAGCTCCCTGCATCATTGAGGGAAACCTTGGAGTCATACTTCAGAGAATTGAGGAAGCTTGGTATGGAACTTCTTGGGTTGTTAGGAAAAGCCATAGGGATGGAGATGAAGGAAGTGGAAGAGTTTTTTGTTGATGGGATGCAATCAGTGAGAATGACATATTATCCACCATGTCCAAAACCAGAGGTAGTTGTAGGGCTCACCCCCCACTCTGATGCCACAGGCATAACCATCCTTCACCAGGTGAATGGAGTGGAGGGTCTGGAGATAAAGAAAAGTGGGGTTTGGATTCCTGTGATCTTTCTACCAGATGCTTTTGTAGTTAACGTTGGAGACATCATGGAGATTCTAAGTAATGGGGCCTATACCAGCATAGAGCACAGGGCTGCAGTGAACAAAGAGAAGGAGAGAATTTCTATTGCCATGTTCTTCAGCCCCAAATTTGAGGCAGAGATTGGGCCTGTCAAAAGCTTGTTAAATTCGGAAAACCCACCCTTGTTCCAAAGCATGTCGATGGAAGATCACTTCAAACACTTTTTCTCTCGCAATCTTAATGGGAAGACCCACTTGGAGAAAATGAGGGTTAAAACTCTTGACTTGCTGAAAGATTCAACTTAA 663 0.4404 MLINPVERRKPYLLPQLPASLRETLESYFRELRKLGMELLGLLGKAIGMEMKEVEEFFVDGMQSVRMTYYPPCPKPEVVVGLTPHSDATGITILHQVNGVEGLEIKKSGVWIPVIFLPDAFVVNVGDIMEILSNGAYTSIEHRAAVNKEKERISIAMFFSPKFEAEIGPVKSLLNSENPPLFQSMSMEDHFKHFFSRNLNGKTHLEKMRVKTLDLLKDST* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02857 220 SUPERFAMILY Clavaminate synthase-like 4 202 - -
Phac2g02857 220 Pfam 2OG-Fe(II) oxygenase superfamily 64 161 IPR044861 -
Phac2g02857 220 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 4 185 - -
Phac2g02857 220 Gene3D - 2 218 IPR027443 -
Phac2g02857 220 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 58 161 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02857 Phac-Chr2 30150440 30156000 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02857 16 210 Glycosyltransferase AT5G59530 35.000 1.72e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02857 - - vra:106766198 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02857 2 30150440 30156000 Phac2g02857 2 30150440 30156000 ECH