Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02855 ATGGATCTTCACGAAAACCCCCAGAATTCTGGGATGAAGAAACGAAAGCCGGAGCAGGATGATGCTTTGATCAGTGATCATGGAAATTCTATGAGTGTAGGAGAGTCATCTGGGAGTGGTGATCTCTGCAAGAGTTCTACCTCGGGATCACTGAATTCAAACAATCAAAATGGTTCCACTTCTGACATTTCATGTCCAGAAGATGAGGATATGATTGATGATGATGCAGATATGATTGATGATGATGATGCAGATGAAGATGCTGATTATGCTTTTGGTTACAATGATGATATTTATGAAGATGATTATTCAAGTATGCAGGATCAATTTGACAGTGTGGATTTACCTCCTGGGGTGGAGGCATCCCTGCCTTGGTTGAAGGACATTTCTTCTAGTGAATGCAAGCAAGCTGTTGCCTTTCCCCGTACAGAATCTAGTTCGAAGGGAAAGGTGGATGAAACTAATGATATGGTCATGCAGAAGTTTCAACAATTCAAGCAATTTGATACTGTTGATTCTTTTCCTGATCATCACTATGATAAGGAGGGAACTTCAGAGTCACAGAAACCTAAAAATTGGGCCAAAAAGATCCAGGAGGAATGGAAAATTTTAGAGGAAAATCTGCCTGACACAATCTTTGTGAGAGTTAGTGAATCAAAGATGGAGCTTCTAAGGGTTGTCATCATTGGACCTCAAGGCACCCCATATCATGATGGTCTTTTCTTTTTTGATTGTCTCTTTCCTTCTAACTATCCTGCAGTTCCACCGAAAGTTCACTACCACTCAGGTGGCCTAAGACTAAATCCAAATTTATATCAATGTGGAAAAGTCTGCCTTAGTCTTTTGGGAACTTGGCATGGTAAGAATAGTGAGAACTGGATTGCAGAAAAATCAACCATGCTACAAGTATTGGTTTCAATACAAGCTCTAATTCTAAACGAGAAGCCTTTCTTTAATGAGCCTGGATATATATCAACATATCCTGGTGCGGAGGGGCAAAGAAGATCTAAGGAGTACAACGAGAATACATTTATTTTATCCTTGAAGACAATGATGTATACCCTGCGTAAACCTCCAAAGCCCTTTGAGGATTTTGTTGCAGGGCATTTCCGAACCCGAGCATATTTCCTGCTGACAGCATGTAAATCATACGTGGAGGGGGCTCCGGTTGGGTCGGTTGTACATAATCTAGTTCCAAGTATTAGTTCTACAACTGCGGCTAACGGCCAAAAGGAATTCCAGTCAGCTGTGAGTAGGATGATGAATACTCTTATTGCATTTTTCACCAAAAATGGCTCCACAGACTGTGATGAGTTTCGATCTCTTGAGATTTATAACTTGTCTCCTGTGGCTACTGCAAACTTAGAGGTTTACAAGATAGAGTCTTCTGGCACAACAACATTGACCCAGGTGTGA 1416 0.4103 MDLHENPQNSGMKKRKPEQDDALISDHGNSMSVGESSGSGDLCKSSTSGSLNSNNQNGSTSDISCPEDEDMIDDDADMIDDDDADEDADYAFGYNDDIYEDDYSSMQDQFDSVDLPPGVEASLPWLKDISSSECKQAVAFPRTESSSKGKVDETNDMVMQKFQQFKQFDTVDSFPDHHYDKEGTSESQKPKNWAKKIQEEWKILEENLPDTIFVRVSESKMELLRVVIIGPQGTPYHDGLFFFDCLFPSNYPAVPPKVHYHSGGLRLNPNLYQCGKVCLSLLGTWHGKNSENWIAEKSTMLQVLVSIQALILNEKPFFNEPGYISTYPGAEGQRRSKEYNENTFILSLKTMMYTLRKPPKPFEDFVAGHFRTRAYFLLTACKSYVEGAPVGSVVHNLVPSISSTTAANGQKEFQSAVSRMMNTLIAFFTKNGSTDCDEFRSLEIYNLSPVATANLEVYKIESSGTTTLTQV* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02855 471 MobiDBLite consensus disorder prediction 66 89 - -
Phac2g02855 471 SMART ubc_7 195 352 - -
Phac2g02855 471 Gene3D Ubiquitin Conjugating Enzyme 150 431 IPR016135 -
Phac2g02855 471 MobiDBLite consensus disorder prediction 25 64 - -
Phac2g02855 471 CDD UBCc 195 342 IPR000608 -
Phac2g02855 471 MobiDBLite consensus disorder prediction 1 23 - -
Phac2g02855 471 SUPERFAMILY UBC-like 177 359 IPR016135 -
Phac2g02855 471 MobiDBLite consensus disorder prediction 1 89 - -
Phac2g02855 471 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 192 352 IPR000608 -
Phac2g02855 471 FunFam Putative ubiquitin-conjugating enzyme E2 38 155 431 - -
Phac2g02855 471 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 127 435 - -
Phac2g02855 471 Pfam Ubiquitin-conjugating enzyme 197 322 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02855 Phac-Chr2 30134974 30139699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02855 164 436 Miscellaneous Gene Families AT2G33770 52.364 1.46e-87 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02855 K10581 - gmx:100812552 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02855 2 30134974 30139699 Phac2g02855 2 30134974 30139699 ECH