Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02729 ATGCCTGGTTTTGTGGCCGAAAAGAAGAGATATACAGACCCAAATATGTGTTTTCCCAATTTGGCCAACCATGGTAAACCAACCCTTTCGAAAAGCAATCGTTGTGTGAGGTCTGAGGCTCTAGATGATGATGATGATGACGATAGTAGTATCCCCATTCTACCTGGGTTGCCTGATGATGTTTCAAAGCACTGCCTTGCACTTGTGCCTCGTTCTAACTTCCCTGCCATGGGCGGTGTAAGTAAGAGATGGAGAGGCTTTATTCGAAGCAAAGAATTTATAACCGTGAGAAAATTGGCTGGGATGCACGAGGAATGGCTCTATATCTTAACAGCCGGTAGTGAAGGAAAAGGGAGCCATTGGGAGGTCATGGATTGTCTGGGTCACAATCGCCGATCTCTTCCACCAATGCCTGGTCCAGCCAAGGCTGCCTTTGGGGTGGCGGTTCTCAATGGAAAGCTCCTTATTATGGCTGGCTGTTCATCAATTGATGGAACTGCATCTGTCTCGGAAGAGGTTTATCAATATGATTCTTGTCTCAACAGCTGGAGCAGATTATCAAGCATGAATGTGGCTCGGTATGACTTTGCTTGTGCTGAAGTCAATGGCTTGGTTTATGCTGTTGGAGGCTACGGTGCAAACGGTGAAAGTCTCTCCTGTGCGGAGGTGTATGATCCGGATACCAACAAGTGGACGCCAATAGAGAGCCTCCGTCGTCCAAGATGGGGTTGCTTTGCCTGTGGATTTGAAGGGAAGCTCTATGTCATGGGTGGAAGATCAAACTTTACAATTGGAAATTCCAAGTTTGTTGATGTGTACAGCCCAGAGAAGCATGACTGGTGTGAGATGAAAAATGGGTGTGTGATGGTCACTGCTCATGCAGTGCTGGGAAAGAAGTTGTTCTGTATGGAGTGGAAAAACCAGCGGAAGTTAGCAATATTCAATCCAGAGGACAATTCATGGAAAATGGTACCAGTCCCTTTGACAGGGAGTTCAAGCATTGGTTTTCGGTTTGGGATATTGGATGATAAGTTGTTGCTGTTCTCACTGGAGGAAGATCCTTCCTATAGGACTTTGTTGTATGATCCAAGTGCAGCCCCAGGATCTGAGTGGCAGACTTCTGATATAAGACCATCTGGTTTGTGCTTATGCAGTGTAACTATTAAGGCCTGA 1173 0.4621 MPGFVAEKKRYTDPNMCFPNLANHGKPTLSKSNRCVRSEALDDDDDDDSSIPILPGLPDDVSKHCLALVPRSNFPAMGGVSKRWRGFIRSKEFITVRKLAGMHEEWLYILTAGSEGKGSHWEVMDCLGHNRRSLPPMPGPAKAAFGVAVLNGKLLIMAGCSSIDGTASVSEEVYQYDSCLNSWSRLSSMNVARYDFACAEVNGLVYAVGGYGANGESLSCAEVYDPDTNKWTPIESLRRPRWGCFACGFEGKLYVMGGRSNFTIGNSKFVDVYSPEKHDWCEMKNGCVMVTAHAVLGKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILDDKLLLFSLEEDPSYRTLLYDPSAAPGSEWQTSDIRPSGLCLCSVTIKA* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02729 390 PANTHER OS02G0202900 PROTEIN 9 386 IPR045887 -
Phac2g02729 390 Pfam Kelch motif 192 237 IPR006652 GO:0005515
Phac2g02729 390 Pfam Kelch motif 143 190 IPR006652 GO:0005515
Phac2g02729 390 SUPERFAMILY F-box domain 51 94 IPR036047 GO:0005515
Phac2g02729 390 CDD F-box_AtAFR-like 53 97 - -
Phac2g02729 390 SUPERFAMILY Kelch motif 104 351 IPR015915 GO:0005515
Phac2g02729 390 Gene3D - 89 388 IPR015915 GO:0005515
Phac2g02729 390 Pfam F-box domain 56 93 IPR001810 GO:0005515
Phac2g02729 390 SMART kelc_smart 153 203 IPR006652 GO:0005515
Phac2g02729 390 SMART kelc_smart 204 251 IPR006652 GO:0005515
Phac2g02729 390 SMART kelc_smart 252 297 IPR006652 GO:0005515
Phac2g02729 390 Pfam Kelch motif 241 285 IPR011498 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02729 Phac-Chr2 28860143 28864280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02729 47 235 Miscellaneous Gene Families AT4G33900 28.571 9.84e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02729 - - gmx:100815474 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02729 2 28860143 28864280 Phac2g02729 2 28860143 28864280 ECH