Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02611 ATGAAGCATGTTGATGAGGGGGGTACCATGCTTGGCGCCACCAGACGCGTAGTTGGGTTCATTCCTAGGAGGTTACGACCAGTGCGGCAAGTGCATGGAGATGGGGATGGCGAAGAGCGTTTACATTTTCACAAGAGCAAAGGTCAACACATTCTCATCAACCCTAGAGTTCTTGATACCATCGTTCGCAAATCCGCCATAAATCCAACAGACACTGTCCTCGAAATCGGACCTGGCACAGGCAACCTCACCCTCAAGCTTCTCGAAGCCGCGCACAAGGTAGTAGCCTTCGAGATTGACCACCGCCTTGTCCAGGTTCTCGAGAAGCGTGTTCTTCAACGTGGTCTCAAAGATAAGCTCAGGGTTATTGAAAGAGATGCAATGAAAGCCCCGTTTCCGCGGTTTGATCTTGTTGTGGCCAACATTCCTTATCAGATATCTTCCCCTCTCGTGATCAAACTGGTGTATGGGTCGACGCCGTTTCGGAGTGCCACGCTTCTTCTTCAGAAAGAGTTCGCTCGAAGGTTAGTGGCTAATCCCGGTGACTCTGAGTTTAGCCGGTTGTCGGTGAATGTGAAGCTTCTGGCTGATGTGGAGCTTGTGATGGATGTAAGCAGGAGGGACTTTCTCCCTTCCCCCAAAGTTGATTCTTCTGTGGTCATAATCCGCCCTAAGCCTCAGGTTCCCAATGTGGATCTCCGTGAGTGGAGGGCTTTCACCTCGAGTTGTTTCAATAACCGTAACAAGACACTAGGGGCATCTTTTAAGAACAAGAGGAAAGTCTTTGAGTTGCTCAAAATCTCCAATGAAAACGATAAAGCTTCTTCCCACAAGGGTGATGACGCTGAAGATGAAGGAGGCTTTACCTCGTTCAAGGAAAAGATTATTGGGGTGCTTAGAACGGGAGAGTTTGAAGATAAAAGGCCTGCAAAACTTTCTATCGAGGAGCTTCTGCATTTGCTCTCTTTGTTCAATCAAGCTGGCATTTATTTTGGATGCCGTGAACATTTCAAGAGGGAAGATAGGTTTGATGCCGATGACGAATAG 1047 0.4814 MKHVDEGGTMLGATRRVVGFIPRRLRPVRQVHGDGDGEERLHFHKSKGQHILINPRVLDTIVRKSAINPTDTVLEIGPGTGNLTLKLLEAAHKVVAFEIDHRLVQVLEKRVLQRGLKDKLRVIERDAMKAPFPRFDLVVANIPYQISSPLVIKLVYGSTPFRSATLLLQKEFARRLVANPGDSEFSRLSVNVKLLADVELVMDVSRRDFLPSPKVDSSVVIIRPKPQVPNVDLREWRAFTSSCFNNRNKTLGASFKNKRKVFELLKISNENDKASSHKGDDAEDEGGFTSFKEKIIGVLRTGEFEDKRPAKLSIEELLHLLSLFNQAGIYFGCREHFKREDRFDADDE* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02611 348 CDD AdoMet_MTases 72 151 - -
Phac2g02611 348 Gene3D Vaccinia Virus protein VP39 43 227 IPR029063 -
Phac2g02611 348 Pfam Ribosomal RNA adenine dimethylase 42 270 IPR001737 -
Phac2g02611 348 Gene3D - 229 332 - -
Phac2g02611 348 PANTHER DIMETHYLADENOSINE TRANSFERASE 40 326 IPR001737 -
Phac2g02611 348 NCBIfam 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA 43 322 IPR011530 GO:0000179|GO:0006364
Phac2g02611 348 ProSitePatterns Ribosomal RNA adenine dimethylases signature. 73 100 IPR020596 GO:0000154|GO:0000179|GO:0008649
Phac2g02611 348 FunFam rRNA adenine N(6)-methyltransferase 43 227 - -
Phac2g02611 348 Hamap Ribosomal RNA small subunit methyltransferase A [rsmA]. 41 325 IPR011530 GO:0000179|GO:0006364
Phac2g02611 348 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 40 326 IPR029063 -
Phac2g02611 348 ProSiteProfiles rRNA adenine N(6)-methyltransferase family profile. 43 328 IPR001737 -
Phac2g02611 348 SMART rADcneu6 57 226 IPR020598 GO:0000154|GO:0000179|GO:0008649
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02611 Phac-Chr2 27317190 27318973 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02611 K14191 - gmx:100790908 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02611 2 27317190 27318973 Phac2g02611 2 27317190 27318973 ECH