Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02598 ATGTCGGGTTCTTTCAAGAAAAAAGCAATCAATGCCTCAAACATGCTGAGGAATTCTTTGACGAGAAAGGGTAGGCGAAGCAGCAAGGTCATGTCCATTGAAATTGAGGATGTCCACGATGCTGAGGAGTTGAAAATAGTTGATGAGTTCCGTCAAGCTCTTATTTTGGACGAACTACTCCCTGCAAAGCACGATGACTATCATATGATGCTTAGATTCCTGAAGGCCAGAAAGTTTGATATTGAGAAGACGAAGGAAATGTGGTCTGAAATGCTCAAATGGAGGAAGGAGTTTGGTGCTGACACTATTCAGGAGGACTTTGAATTCAAAGAAATTGATGAAGTCTTGCAATATTATCCCCAAGGACACCATGGTGTGGACAAAGAGGGAAGGCCCGTGTATATAGAGAGATTAGGCCAAGTCGATGCCGGGAAAATGATGCAAGTCACAACCATGGATCGCTATATCAAATACCATGTGAAGGAGTTTGAGAGGACATTCGATGTAAAGTTTGCAGCTTGTTCGATTGCTGCGAAGAAGCACATCGATCAAAGTACAACTATCCTGGATGTGCAGGGAGTGGGGCTTAAGAGCTTCAACAAACATGCTAGGGAACTCGTTACTCGTCTTCAGAAGATTGACGGTGATAACTATCCTGAGACCTTGAACCGCATGTTCATCATCAATGCAGGTTCTGGATTCAGAATACTGTGGAACACCGTAAAATCATTCCTTGACCCTAAGACCACGGCAAAAATAAATGTTCTTGGCAACAAGTTTGACACCAAATTGCTAGAAATAATTGATGCAAGTGAATTGCCTGAATTTTTGGGAGGTACTTGTACTTGTGCTGATCAAGGAGGCTGTATGCGCTCTGATAAGGGTCCCTGGAAGGATCCAGAAGTATTGAAGATGGTTCAGAGTGGTGCTCACAAATGCTCAAGAAGAGGTGACTCACACGGCGAGGAAGAGAAATCAATTTCTGAGGAACCCGAGACTCCCAAGTCTGAGGCAGCTCCGGCAACTCCTAAGTCTGAGGCAACTCCCACCACTCAGGTTACTCCCGTTGCTGAAGAGGTCCCTGCTAAGCCTGTTGAGTTAGCTCCAACGGTTGATACAACTCCTTTGAATAAGCCTAAGGACGTAGCCCCTACGGTGGATTCCACTGCTGCTGCTGCAGTAGCAGCAGCAGCAACAGGCTTGTCTCCTGCAGAGTTTGCGGCTGTGATGAAACGCATGGCTGAGTTGGAGGAGAAAATGGTCATCATGAATAAGAAGCCTGCAGCCATGCCACCCGAGAAGGAGCAAATGCTGAATACAACTATAACTCGGGCCGATGACTTGGAGAAGCAACTTTTGGCCACCAAGAAGGCTCTGGAGGATTCACTTGTTCGGCAAGAAGAGCTTTCGGCTTACATTGAGAAAAAGAAAAAGAAGAAAAAGAGATTTTACTTCTTTTAA 1461 0.4531 MSGSFKKKAINASNMLRNSLTRKGRRSSKVMSIEIEDVHDAEELKIVDEFRQALILDELLPAKHDDYHMMLRFLKARKFDIEKTKEMWSEMLKWRKEFGADTIQEDFEFKEIDEVLQYYPQGHHGVDKEGRPVYIERLGQVDAGKMMQVTTMDRYIKYHVKEFERTFDVKFAACSIAAKKHIDQSTTILDVQGVGLKSFNKHARELVTRLQKIDGDNYPETLNRMFIINAGSGFRILWNTVKSFLDPKTTAKINVLGNKFDTKLLEIIDASELPEFLGGTCTCADQGGCMRSDKGPWKDPEVLKMVQSGAHKCSRRGDSHGEEEKSISEEPETPKSEAAPATPKSEATPTTQVTPVAEEVPAKPVELAPTVDTTPLNKPKDVAPTVDSTAAAAVAAAATGLSPAEFAAVMKRMAELEEKMVIMNKKPAAMPPEKEQMLNTTITRADDLEKQLLATKKALEDSLVRQEELSAYIEKKKKKKKRFYFF* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02598 486 Gene3D - 99 310 IPR036865 -
Phac2g02598 486 Pfam CRAL/TRIO domain 117 279 IPR001251 -
Phac2g02598 486 FunFam SEC14 cytosolic factor 99 311 - -
Phac2g02598 486 SUPERFAMILY CRAL/TRIO N-terminal domain 39 107 IPR036273 -
Phac2g02598 486 MobiDBLite consensus disorder prediction 311 332 - -
Phac2g02598 486 MobiDBLite consensus disorder prediction 309 378 - -
Phac2g02598 486 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 3 477 - -
Phac2g02598 486 SMART CRAL_TRIO_N_2 66 91 IPR011074 -
Phac2g02598 486 Coils Coil 406 426 - -
Phac2g02598 486 SUPERFAMILY CRAL/TRIO domain 111 307 IPR036865 -
Phac2g02598 486 Gene3D - 9 98 - -
Phac2g02598 486 Pfam CRAL/TRIO, N-terminal domain 63 89 IPR011074 -
Phac2g02598 486 CDD SEC14 112 280 IPR001251 -
Phac2g02598 486 PRINTS Cellular retinaldehyde-binding protein signature 271 280 - -
Phac2g02598 486 PRINTS Cellular retinaldehyde-binding protein signature 69 91 - -
Phac2g02598 486 PRINTS Cellular retinaldehyde-binding protein signature 238 257 - -
Phac2g02598 486 SMART sec14_4 111 282 IPR001251 -
Phac2g02598 486 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 111 285 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02598 Phac-Chr2 27182025 27186759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02598 47 276 Acyl Lipid Metabolism Gene Families AT5G47730 28.452 1.67e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02598 K26544 - gmx:100796901 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02598 2 27182025 27186759 Phac2g02598 2 27182025 27186759 ECH