Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02596 ATGGGAATGTACTCCAACAAGTTTTTTTCTTCTTTTACATCGGCGTCATCATGGTTCGAGGTGTATGCTGCCTTCTCCACAATCATGATGCTCTTCAGAACTGCAATCAATGATCTCATTCCCCATCAATTTCGATCCTTTATCGCCTCAAAGCTAGAGGCCTTCTTCTCCAAATACCAAGCAAATACCAATGTCTCTGTCAAAATTAACCAATTTTGGGATGAAAATGTTGGAGAGCGCAATGAACTTTTCGATGCTGCCCTGGCGTACCTCCCCACACAGATTAGTAACACCTACAAATCGCTGAAAGTTGGCAGACTGCAATACCGGAAACACCTTGAGCTTGCAGTGGATGGAAGTGAAGATGTGGTTGACCAATTTGAAGGCATCAAATTCACTTGGAAGCTGGATGAGGGGTCCAAGGAGGAGTCTAATAACAACAGCAGGAGGTATAACTTTTTGTTAACCTTCGATGAGAAACATAGACAGAGGGTATTGGATCGGTATCTCCCACATGTGCTTAAAACATTTGAGACCATGAAAGATCAGAGAAGGATTGTAAAACTCTATTCCAGGTTAGATGACTATTGGAACGAAAGTGAGTTATCACATCCTGCAACATTCGACTCACTAGCCTTGTGTCCTGAGTTGAAGAAAGATATAATTGATGATTTGGCTAGGTTCTTGAGGAGGAAGGACCTTTACAAGAAAGTGGGAAAGCCTTGGAAGCGTGGCTACTTGTTGTATGGACCCCCAGGAACTGGAAAATCTAGCCTTATTGCAGCTATGGCAAACTACTTGAAATTCGATGTGTATGATTTGGAGCTTTCTTCTATCTACTCTAACTCGGACCTCATGAGATCCATGAAGGAAGCATCTAACCGTTGCATCGTTGTGATTGAAGACATAGACTGTAACAAAGAGGTGCATGCAAGATCAAAGCTGAAGGGTCCTTCAGATGATCGAGATTCAGACTCAGACAGTGAGGATCCCAAGATGAGGTCAAAGAGGTTTACACTATCGGGTCTGCTTAACTACATGGACGGTTTGTGGTCAAGTGGTGGAGAGGAGCGGATTATAATCTTCACTACTAACCACAAAGAGAAAATTGACCCAGCACTGCTGCGCCCTGGTCGTATGGACATGCACATTCACTTGTCCTTCCTCAAAGGCAAGGCCTTTCGAATTCTAGCTTCCAATTACTTAGACGTTGAAGGAGATCATCCACTCCTTCAACAAATTGATGATCTGCTGGAGAAAATACAAGTCACCCCTGCAGTGGTAGGGGAGCAACTAATGAGATATGAGGATCCTGATGTTTGTTTGGAAGAACTTGTTCAATTTCTCAAACAAAAGGCCAAGGAAAGTGATTCTGAGTGA 1380 0.4319 MGMYSNKFFSSFTSASSWFEVYAAFSTIMMLFRTAINDLIPHQFRSFIASKLEAFFSKYQANTNVSVKINQFWDENVGERNELFDAALAYLPTQISNTYKSLKVGRLQYRKHLELAVDGSEDVVDQFEGIKFTWKLDEGSKEESNNNSRRYNFLLTFDEKHRQRVLDRYLPHVLKTFETMKDQRRIVKLYSRLDDYWNESELSHPATFDSLALCPELKKDIIDDLARFLRRKDLYKKVGKPWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSSIYSNSDLMRSMKEASNRCIVVIEDIDCNKEVHARSKLKGPSDDRDSDSDSEDPKMRSKRFTLSGLLNYMDGLWSSGGEERIIIFTTNHKEKIDPALLRPGRMDMHIHLSFLKGKAFRILASNYLDVEGDHPLLQQIDDLLEKIQVTPAVVGEQLMRYEDPDVCLEELVQFLKQKAKESDSE* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02596 459 PANTHER BCS1 AAA-TYPE ATPASE 23 454 - -
Phac2g02596 459 Coils Coil 446 459 - -
Phac2g02596 459 Gene3D - 385 457 - -
Phac2g02596 459 SMART AAA_5 242 390 IPR003593 GO:0016887
Phac2g02596 459 Pfam ATPase family associated with various cellular activities (AAA) 247 386 IPR003959 GO:0005524|GO:0016887
Phac2g02596 459 Gene3D - 198 384 IPR027417 -
Phac2g02596 459 ProSitePatterns AAA-protein family signature. 358 376 IPR003960 GO:0005524|GO:0016887
Phac2g02596 459 MobiDBLite consensus disorder prediction 311 333 - -
Phac2g02596 459 Pfam Domain associated at C-terminal with AAA 40 136 IPR025753 -
Phac2g02596 459 CDD RecA-like_BCS1 221 386 - -
Phac2g02596 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 437 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02596 Phac-Chr2 27169674 27171646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02596 207 381 Miscellaneous Gene Families AT5G58870 31.522 7.04e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02596 - K08900 gmx:100789094 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02596 2 27169674 27171646 Phac2g02596 2 27169674 27171646 ECH