Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02569 ATGTGGCGATCACAGGAGTTGTTGACGAAGCTGAAACCGAAAGCGGTTAGTGGGGTCCAGCTGAAATGGATGAGCACGGTGATGTGTTTGGGTGATGGAAGCCAAGGAGCCGTTGGATCTCCGGTGGGTGTGGGACTCCACGCATACGAACCCACCCCTGTTGCCACTCTCCCTTCCGACATCGTTAGCGTCCACGCCGGACACTACCACTCCCTGGCCCTTACTTCTCACGGCCATCTCTGGGCCTGGGGCCGAAACAACGAGGCCCAACTCGGCCGCGGCCCATCCTCTAGAGAATCATGGCATGAGGCAGAGAGAGTGAAGGGGTTAGAGAATGTGAACGTGTGTGCTGCTTTTGCTTCGGGTGTTGTTTCCGCTGGCGTTGGGGATGACGGTTCGGTGTGGGTGTGGGGGAAGTCCAAACGCGGTCAACTTGGCCTCGGTGAAAATATCACCGAGGCTCTTTTGCCGACCAAAATTGAAGCACTTTCTGGAGAAAACGTCTCAAAGGTCTCGTTTGGATGGGGACATGCTCTCGCTCGTACTGCTGATGGAAAGTTGTTTGGATGGGGTTATTCTGCGGACGGTAGGATAGGCAAAATGGGTAATCGCTTTGACACGTCTCTGCTGGAATCCACGTTTCAGAATAGCTCACAACTCTCTAGTTCCGACCTCGAAAATGCTGAAAAGAGAGTCTTGCAAGGAATGGAACAGGAGAATGACATGCCAATAGTATGGGAGCCTCGCTTGGTGGAAGAATTACATGGTGTTCATGTTCTGGACATTGCATGTGGCCTTGATCATTCTCTGGTTCTTTGCCGTGACGGTGTGCTCTTGAGCTGTGGGAGCAACGTGTATGGCCAGTTGGGTCGAGCTGAAGCAGATTTGGGGATTTTGCCAGTTGATATGACCGTCCCTCCCATTTTTATTGCAGCAGGGCTTGGACATTCATTGGCAATATGCCAGCTAGGTGAATCAGATGGTAGTGTGGGGACTACAAACATTGCTTCATGGGGATGGAACCTTAGTTCTCAGCTTGGGAGGCTCGGGGATGGAAAAGTACCCTCTTTCATTGATGTATTGAATGGGGAAAACCCTGTCTCGGTTTCAGCAGGGCGTGCACACTCCCTTGCTCTCACGTCCAAAGGGGAATTGTGGTTGTGGGGCTCTGGTAAAAGTGGCAGACTTGGATTCGCTAGTTCTGCTGACCAAGTGGAGCCATTTTGCCTTGATTCCCTGGATGGTTTTCAAATTTTACAGGCCGTGGCGGGGTTTGATCATAATCTGGTCCTAGTTGCTGGCTGA 1305 0.5195 MWRSQELLTKLKPKAVSGVQLKWMSTVMCLGDGSQGAVGSPVGVGLHAYEPTPVATLPSDIVSVHAGHYHSLALTSHGHLWAWGRNNEAQLGRGPSSRESWHEAERVKGLENVNVCAAFASGVVSAGVGDDGSVWVWGKSKRGQLGLGENITEALLPTKIEALSGENVSKVSFGWGHALARTADGKLFGWGYSADGRIGKMGNRFDTSLLESTFQNSSQLSSSDLENAEKRVLQGMEQENDMPIVWEPRLVEELHGVHVLDIACGLDHSLVLCRDGVLLSCGSNVYGQLGRAEADLGILPVDMTVPPIFIAAGLGHSLAICQLGESDGSVGTTNIASWGWNLSSQLGRLGDGKVPSFIDVLNGENPVSVSAGRAHSLALTSKGELWLWGSGKSGRLGFASSADQVEPFCLDSLDGFQILQAVAGFDHNLVLVAG* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02569 434 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 276 323 IPR000408 -
Phac2g02569 434 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 25 431 - -
Phac2g02569 434 Gene3D - 233 329 IPR009091 -
Phac2g02569 434 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 25 77 IPR000408 -
Phac2g02569 434 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 78 139 IPR000408 -
Phac2g02569 434 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 262 272 IPR000408 -
Phac2g02569 434 Gene3D - 4 230 IPR009091 -
Phac2g02569 434 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 333 382 IPR000408 -
Phac2g02569 434 PRINTS Chromosome condensation regulator RCC1 signature 378 399 IPR000408 -
Phac2g02569 434 PRINTS Chromosome condensation regulator RCC1 signature 61 74 IPR000408 -
Phac2g02569 434 PRINTS Chromosome condensation regulator RCC1 signature 80 96 IPR000408 -
Phac2g02569 434 PRINTS Chromosome condensation regulator RCC1 signature 187 201 IPR000408 -
Phac2g02569 434 PRINTS Chromosome condensation regulator RCC1 signature 171 187 IPR000408 -
Phac2g02569 434 PRINTS Chromosome condensation regulator RCC1 signature 26 42 IPR000408 -
Phac2g02569 434 PRINTS Chromosome condensation regulator RCC1 signature 132 148 IPR000408 -
Phac2g02569 434 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 383 434 IPR000408 -
Phac2g02569 434 Pfam Regulator of chromosome condensation (RCC1) repeat 61 88 - -
Phac2g02569 434 Pfam Regulator of chromosome condensation (RCC1) repeat 259 288 - -
Phac2g02569 434 Pfam Regulator of chromosome condensation (RCC1) repeat 367 394 - -
Phac2g02569 434 SUPERFAMILY RCC1/BLIP-II 22 432 IPR009091 -
Phac2g02569 434 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 132 184 IPR000408 -
Phac2g02569 434 Gene3D - 330 434 IPR009091 -
Phac2g02569 434 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 185 275 IPR000408 -
Phac2g02569 434 Pfam Regulator of chromosome condensation (RCC1) repeat 131 180 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02569 Phac-Chr2 26847786 26849357 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02569 - - gmx:100819916 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02569 2 26847786 26849357 Phac2g02569 2 26847786 26849357 ECH