Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02543 ATGGTGCACAGCGCGTACGATTGCGTGGAGCTGGTGCGCGAGTGCCCTGCCAAGATCGAATCCATCGAATCCTACGGTTCGAAGCTCCTCCTGGGTTGCTCCGATGGATCGCTCCGAATATTCGCGCCGGAAACGGAATCCTCCTCCGACGGCTCCAACTCCTACGCGTTGGAGAGGAACCTTGTCGGGTTCGCGAAGAAGCCCGTGCTATCAATGACGGTGGTGGAGTCGCGAGAGTTCCTCATATCGCTCTCTGAATCCATCGCTTTCCACAGACTCCCTTCCTTCGAGACCATCGCGGTCATCACCAAGGCCAAGGGTGCCAACGTCTTCTGCTGGGACCACCGCCGAGGCTTCCTCTGCTTCGCCAGGCAGAAGCGCGTTTGCATCTTCAGACACGACGGTGGCAGGGGATTTGTGGAGGTGAAAGAGTATGGCGTGGGGGATACGGTGAAATCCATGTGTTGGTGCGGCGAGAATATATGTTTGGGGATTAGAAGAGAGTATGTGATTCTGAATTCTTCAAATGGAGCTTTGTCTGAGGTTTTCACTTCCGGGAGACTAGCGCCTCCTCTGGTCGTTTCTCTTCCCACTGGAGAACTTCTTCTTGGAAAGGAGAATATTGGGGTTTTTGTGGACCAAAATGGGAAGCTTCTTCCCGAAGGTAGGATTTGCTGGTCTGAGGCTCCTTTGGAAGTTGTGATTCAGAAGCCGTATGCTATAGCTTTGCTGCCCAGATTTGTGGAGATTCGATCCCTCCGAGCTCCTTATCCGTTGATACAGACGGTTGTTCTTCGAAATGTTCGTCACCTTTGCCAGAGCAATGATTCCATGATACTTGCTTTGGATAATTCAATTCATGGCCTCTTCCCTGTTCCCCTTGGAGCCCAGATAGTCCAATTAACAGCTTCTGGCAACTTTGAGGAGGCCTTGTCATTGTGCAAACTTCTTCCACCTGAAGATTCAAGTCTCCGTGCTGCAAAGGAGGGTTCAATTCATATAAGATACGCTCACTATCTTTTTGAGAATGGGAGCTATGAAGAGGCTATGGAACATTTTCTGGCATCTCAAGTAGATATAACCCATGTGCTTTCCCTGTATCCATCCATTATTCTTCCAAACACAACTATTGTTCACGAGCTAGAAAAGTTAGACATTTATGGCGATGCTTCACATCTCTCAAGAGCTTCTTCAGGTGTGTCAGATGATATGGAACCCTCATCAACTTCTCATATGTCAGAATCTGATGAGAATGCAGCACTTGAATCAAAAAAAATGAACCATAATATGCTTATGGCTCTCATAAAATACTTACAGAAGAAGAGATATAGTTTTATTGAGAAGGCCACTGCTGAAGGAACTGAAGAAGTCGTTTTAGATGCTGTTGGGGATAACTTTGCATCTTACAATAGGCTTAAGAAATCAAACAAGGGGCGTGGTAATATGCCTGTTAGTTCTGGAGCTCGGGAGATGGCTTCAATATTGGATACTGCTTTACTCCAAGCATTGCTTCTAACTGGACAACCTTCAGTGGCTTTAGAGTTACTGAGAGGTGTTAACTACTGTGATTTGAAAATATGTGAGGAAATACTTCGAAAAGACAACCACAGTGTTGCTTTATTAGAACTTTACAAGCACAATTCACTGCACCGGGAGGCTCTTGAACTTCTTCACAAATTGGTGGATGAGTCAACATCTAGCCAGTCTAAAATTACACAAAGATTCAAGCCTGAGGATATTGTGGAGTATCTCAAGCCGCTCTGTGGGACAGACCCCATACTTGTACTAGAGTTCTCAATGCTTGTTCTTGAAAGCTGCCCATCTCAAACTATAGAGCTCTTTCTGTCTGGAAACATTCAAGCAGATATGGTGAGCTCATATTTGAAGAAGCATTCTCCAACCATGCAAGCCAGGTACTTGGAGCTCATGCTTGCAATGAATGAGAATGCGGTATCTGGCAATTTGCAGAATGAAATGGTGCACATATATCTTTCTGAAGTACTCGATTGGCATGCTGGTTTATGTGCTTCAAAAAAATGGGATGAGAAAGATTATTCCCCAACAAGAAAAAAATTATTGTCTGCCTTGGAGACCATTGCAGGATACAATCCAGAGGCTTTGCTAAAACGTCTTCCACCAGATGCTTTATATGAAGAGCGTGCGATATTGTTGGGAAAAATGAACCAACATGAACTGGCATTATCTTTGTATGTTCACAAGCTCAATGCTCCAGAACTGGCACTGTCATATTGTGATCGAGTCTATGAGTCTATGCACCAGCCATCTGCAAAATATTCCAGTAACATATACCTTGTGCTTTTGCAAATTTATTTGAATCCTCGAAGGACCACAGCAGGTTTTGAAAATAGAATTACAAATCTATCATCCTCACAGAATAAAACTATTCCAAAGCTTACTTCTACGCCATCCATAAGAAGTAGAGGTCGAGGGTCTAAGAAAATTGCTGCAATAGAGGGTGCAGAGGACACAAAAGTTAGTTTAAGCAGCACTGACAGTGGCAGGAGTGATGGTGATGCAGATGACTATAGTGAGGGTGGTTCTACTACTATCATGCTCGATAAGGTCCTTGATTTGTTGAGCCGCAGGTGGGATAGAATAAATGGAGCTCAGGCCCTTAAACTTCTGCCGAAAGAGACAAAATTACAGGACCTGCTTTCATTTCTTGGACCCCTTTTGAAAAAATCAAGTGAAATGTACCGAAACTGTTCGGTGATCAAGAGCTTGAGACAAAGTGAGAACCTTCAGGTGAAAGATGAACTGTATAGTCAGAGGAAAGCAGTTGTGAAGATAACCGGTGATAGCATGTGCTCTCTGTGCCATAAGAAAATAGGGACTAGTGTTTTTGCTGTCTACCCAAATGGTAGCACTCTCGTGCACTTTGTCTGTTTCAGAGATTCTCAAAATATGATAGTAGGCAAAGGGTCTCAATTGAGGAAGCGATTATGA 2967 0.4435 MVHSAYDCVELVRECPAKIESIESYGSKLLLGCSDGSLRIFAPETESSSDGSNSYALERNLVGFAKKPVLSMTVVESREFLISLSESIAFHRLPSFETIAVITKAKGANVFCWDHRRGFLCFARQKRVCIFRHDGGRGFVEVKEYGVGDTVKSMCWCGENICLGIRREYVILNSSNGALSEVFTSGRLAPPLVVSLPTGELLLGKENIGVFVDQNGKLLPEGRICWSEAPLEVVIQKPYAIALLPRFVEIRSLRAPYPLIQTVVLRNVRHLCQSNDSMILALDNSIHGLFPVPLGAQIVQLTASGNFEEALSLCKLLPPEDSSLRAAKEGSIHIRYAHYLFENGSYEEAMEHFLASQVDITHVLSLYPSIILPNTTIVHELEKLDIYGDASHLSRASSGVSDDMEPSSTSHMSESDENAALESKKMNHNMLMALIKYLQKKRYSFIEKATAEGTEEVVLDAVGDNFASYNRLKKSNKGRGNMPVSSGAREMASILDTALLQALLLTGQPSVALELLRGVNYCDLKICEEILRKDNHSVALLELYKHNSLHREALELLHKLVDESTSSQSKITQRFKPEDIVEYLKPLCGTDPILVLEFSMLVLESCPSQTIELFLSGNIQADMVSSYLKKHSPTMQARYLELMLAMNENAVSGNLQNEMVHIYLSEVLDWHAGLCASKKWDEKDYSPTRKKLLSALETIAGYNPEALLKRLPPDALYEERAILLGKMNQHELALSLYVHKLNAPELALSYCDRVYESMHQPSAKYSSNIYLVLLQIYLNPRRTTAGFENRITNLSSSQNKTIPKLTSTPSIRSRGRGSKKIAAIEGAEDTKVSLSSTDSGRSDGDADDYSEGGSTTIMLDKVLDLLSRRWDRINGAQALKLLPKETKLQDLLSFLGPLLKKSSEMYRNCSVIKSLRQSENLQVKDELYSQRKAVVKITGDSMCSLCHKKIGTSVFAVYPNGSTLVHFVCFRDSQNMIVGKGSQLRKRL* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02543 988 Pfam Vacuolar sorting protein 39 domain 2 863 971 IPR019453 -
Phac2g02543 988 MobiDBLite consensus disorder prediction 799 814 - -
Phac2g02543 988 ProSiteProfiles Citron homology (CNH) domain profile. 16 278 IPR001180 -
Phac2g02543 988 Pfam Vacuolar sorting protein 39 domain 1 495 603 IPR019452 -
Phac2g02543 988 MobiDBLite consensus disorder prediction 397 416 - -
Phac2g02543 988 MobiDBLite consensus disorder prediction 799 850 - -
Phac2g02543 988 PANTHER CNH DOMAIN CONTAINING 1 976 IPR032914 GO:0016192
Phac2g02543 988 SUPERFAMILY WD40 repeat-like 25 167 IPR036322 GO:0005515
Phac2g02543 988 Pfam Region in Clathrin and VPS 624 753 IPR000547 GO:0006886|GO:0016192
Phac2g02543 988 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 598 785 IPR000547 GO:0006886|GO:0016192
Phac2g02543 988 MobiDBLite consensus disorder prediction 397 419 - -
Phac2g02543 988 Pfam CNH domain 26 273 IPR001180 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02543 K20183 - gmx:100805342 1807.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02543 2 26694305 26706234 Phac2g02543 2 26694305 26706234 ECH