Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02516 ATGAAGTGCCCGTATTGCTCGGCGGCGCAGGGGCGTTGCGCGACGACGAGCAGCGGGCGTTCGATCACGGAGTGCACGTCTTGCGGGCGCGTGATGGAGGAGCGACAGTCGCATCCTCACCACGTGTTCCACATGCGCGCCCAAGACAACCCTCTATGTCTGGTCACATCGGATCTCCCTCTCCCTCTCAATCAGAACGACGACGAGGACCCTTTCGAGCCCACGGGCTTCATCACTGCCTTTTCCACGTGGTCCCTCGAGCCCAGCCCACTTTACCTTCAGTCATCCCTCTCCTTCTCCGGCCACCTCGCCGAACTCGAACGCACTCTGGAATCCTCCTCTTCCTCCTCCTCTTCTTCGTCTTCAACGGTTGTGGTTGATAATCTGAGGGCCTACATGCAGATTATCGATGTGGCGTCAATTCTAGGGTTGGACTGCGACATTTCCGACCACGCTTTTCAGTTGTTCAGGGATTGTTGTTCCGCCACGTGTTTGAGAAACCGCAGTGTGGAGGCGCTTGCTACTGCCGCTCTCGTTCAGGCCATCAGAGAGGCGCAAGAGCCCAGAACCCTTCAGGAAATTTCAATTGCAGCCAATGTGCCACAAAAGGAAATTGGGAAATACATTAAGATACTTGGTGAGGCTTTGCAGCTAAGTCAACCTATTAACAGCAATTCCATTTCAGTTCATATGCCAAGATTTTGCACGCTTCTTCAGCTCAATAAATCTGCCCAGGAACTGGCTACTCACATTGGAGAGGTCGTGATCAACAAATGCTTCTGTACTCGCAGGAATCCTATTAGCATCTCAGCTGCTGCTATATATTTGGCTTGCCAACTTGAAGACAAACGCAAAACCCAGGCAGAAATTTGTAAGGTGACTGGTCTTACTGAAGTCACTCTCCGTAAAGTGTATAAGGAACTATTGGAGAATTGGGATGATTTGCTTCCCTCTAATTACACCCCAGCTGTTCCTCCGGAGAGGGCATTTCCCACAACGATAATTGCTTCTGGCCGTTCTTCAACAGCTAAGGCTGATGCTGGAGAGGCTATCTCTTCTTTGGACTTAGAAAAGTTGACAGATATTAAACCTAGCAAACCTAATGAGGTCTCAGGCATAGTTCATCAGCCCCGAGGGAAGGATGAGGCTGACGGTAAAAGCAATGCTCAAGCAAGCCATTCCACAGTTAATCAACAGCCACCTTTTTGGCAATCCCAGCTTCCCAGTGGTACCCACAATCATCAGAATGTTTTACAAGGAATGGATATTGATGTATTACAGCGAAGCCACCAACAGCCTGAACACATGGCAGAGGATACAAATGGTGCTGCAAACGGTAATTCGATTAAATCAAGCCAACTTTGCAGTCCTCCTGCTTCGAGTGCAAGTTCTGTTATGAGACAGTTTTCAGCTCCCCCTTCAGCTGGCCCTTCAAATGTTCGATTAGGTCAGTCACCAAAGATAATTCCAGGTTATCCGGATCACTGA 1488 0.4953 MKCPYCSAAQGRCATTSSGRSITECTSCGRVMEERQSHPHHVFHMRAQDNPLCLVTSDLPLPLNQNDDEDPFEPTGFITAFSTWSLEPSPLYLQSSLSFSGHLAELERTLESSSSSSSSSSSTVVVDNLRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTIIASGRSSTAKADAGEAISSLDLEKLTDIKPSKPNEVSGIVHQPRGKDEADGKSNAQASHSTVNQQPPFWQSQLPSGTHNHQNVLQGMDIDVLQRSHQQPEHMAEDTNGAANGNSIKSSQLCSPPASSASSVMRQFSAPPSAGPSNVRLGQSPKIIPGYPDH* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02516 495 FunFam Transcription initiation factor IIB 229 326 - -
Phac2g02516 495 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 358 IPR000812 GO:0006352|GO:0070897
Phac2g02516 495 MobiDBLite consensus disorder prediction 430 495 - -
Phac2g02516 495 FunFam Transcription initiation factor TFIIB 129 220 - -
Phac2g02516 495 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Phac2g02516 495 PRINTS Transcription initiation factor IIB signature 296 310 IPR000812 GO:0006352|GO:0070897
Phac2g02516 495 PRINTS Transcription initiation factor IIB signature 201 216 IPR000812 GO:0006352|GO:0070897
Phac2g02516 495 PRINTS Transcription initiation factor IIB signature 264 280 IPR000812 GO:0006352|GO:0070897
Phac2g02516 495 PRINTS Transcription initiation factor IIB signature 175 194 IPR000812 GO:0006352|GO:0070897
Phac2g02516 495 PRINTS Transcription initiation factor IIB signature 230 248 IPR000812 GO:0006352|GO:0070897
Phac2g02516 495 SMART cyclin_7 229 310 IPR013763 -
Phac2g02516 495 SMART cyclin_7 133 214 IPR013763 -
Phac2g02516 495 SUPERFAMILY Cyclin-like 227 325 IPR036915 -
Phac2g02516 495 CDD CYCLIN_TFIIB_archaea_like_rpt2 226 312 - -
Phac2g02516 495 Gene3D - 229 325 - -
Phac2g02516 495 MobiDBLite consensus disorder prediction 436 481 - -
Phac2g02516 495 Gene3D - 129 220 - -
Phac2g02516 495 MobiDBLite consensus disorder prediction 362 401 - -
Phac2g02516 495 SUPERFAMILY Cyclin-like 130 220 IPR036915 -
Phac2g02516 495 Pfam Transcription factor TFIIB repeat 131 212 IPR013150 GO:0017025
Phac2g02516 495 Pfam Transcription factor TFIIB repeat 229 310 IPR013150 GO:0017025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02516 K03124 - gmx:102662353 899.042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02516 2 26488210 26491107 Phac2g02516 2 26488210 26491107 ECH