Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02470 ATGCGGATGCACTTGAGGTCGTTCTTCTGCGAGGTTAACCTGTTGAACAGGTTAAGCTCGCAAGTGCAATCTCGTTCCTATGCCCGTCGTCGTGAACCGTTTCTCACAAAAGTTTCTCACTACCTCCACCGTGCCAAACTCATTGACTCCATTAGACTCACTCTACGCTCTAACAACCCCAACTCCTCCCTTCCCTCTCTCATAAACCACCGTCTTTTTGACTCTTTCGTGCTCACTCATGCCCTTCGCTCCGCCCCCTCTGCAGATTCCGCTCTTTCCCTTGTCCATGCCCTCGAAAAGAATTCCAGTTTTTCCCACACCCACCACACACTCCATGCACTTGCAACTGTGCTTGCCAAGGCTGGTAGATGCTCCGAGCTCAAATCCCTCATTGATGCTATCCGAGCCAACCGATTCGGCACTATTCGGATCAGCTTCATGAATCTCATGCGGTGGCATGCTGCAGCTAAGGACCTTGACACTGTTCTTCAAGTGTGGGAACAGTATACACTGGTGAGCAACCATCTTTGCACTGAATCATATAACATTGTTATGGCTCTTTATGCTCAAATGAAAAGAGACTCGGAGGCTGTACGAGTTTTTCAGAGGATGATTGATGAGGGGTCTCTGCCGAATTGCAGAAGCTGCACTATAATAATCGAGCACCTTGTGAAGTCCCGGAAGTTATCAGAAGCATTGGAAGTTTTTAACCTGTTGCCTTTGATGAGGGTCAAACGCACTTTGAAGCAGTACTCCGTTCTGCTTGAGGGTTTTGTAGGTAGCAAAAGGTTTGATGAAGTGAGAATTTTAGTTCATGAAATGCAGGTTGATGGAATACTTCCTAGTAGAGGCGTGAGTTTGTTGCTGCAGCAGATGAAGGAGGAAGGAATTCTTGAGGATAAGGAGCAATTACTGCGAGGAATTTTGCCAGATGAGAGAATCAGGAGTGTAAGTTATTCTATTGATAGTGGTGATGAGGCTGAGGATGAGAATGAGAATGAGGGTGAAGATGAGAATATAAATGATGCTAGTCAATGTGATCTTGTTGATGGAGTTCATTTAAAACCGTGGCTGGACCCACGGGCTTTGGTCAGTGCCTTGCGGAATTGGAATCCTGAAGAGGTAGCAGCACTAGAGGGTGCTAACTTTCTATGGACAACAAGGTTGATTTGCAAGATGCTTAGAAACTTCAAAACACCAGAAGCGGCATGGAGTTTCTTCTGCTGGGTTGCTAATCAAAGTGGATTTATTCATGACATATACACGGTACAAAGAATCATGACCCTACTAGCACGCCATGGACGTACTGACTTGGTTAATACACTCATCTCCAAGATCAGAATGGAGGGAATGAGACTACCATTCAGCACCATCAGGCTGATCATTGACTTTTATGGGATTTCAAAAAATGCTGATGCTGCTATGAAGGTTTTCAATGATGATCGAATTCTTTGCGGTCCCATATCAAATGTTAACCTGATGCTGCTGTATTCGTCTCTTCTAAGAACATTGGTGAAGTGTGGAAGAAATTCCGATGCCTTGGATATGCTTGATGACATGATTTTAAATGGTATTTGCCCAGATATCCAGACATTTTCAGGCTTAATGCTCTACTTTTCACAGCTTGGGGACATAAAAACAGTGCAAAAGCTCTTTGCAATGGTTAGGCAGAGCGGTCTAGAGCCAGATGCTTATTTGTTTAAGGTATTAATCCAAGGTTATTGCAAGTCAAATAGAGCTGCACTAGCATGGAGGCTATTTGAAGACATGAAGAATTCTGGTTTATTGCCTGACTCTGCCACCAAAGAGTTGCTAGTGAAGAGTCTCTGGAAAGAGGGCAGACGAAGAGAGGCTGCAGCAGTGGAAGAGAGTTGTGAGGAAATAAATACGGTTCTTCCACTTGCATTGCAAGGTCATGCATGGACTGTCAGCTCTGCAGATCTCACAAGAGTTTATAATATTTATTCTAACTCTTTTGCTTAA 1983 0.4428 MRMHLRSFFCEVNLLNRLSSQVQSRSYARRREPFLTKVSHYLHRAKLIDSIRLTLRSNNPNSSLPSLINHRLFDSFVLTHALRSAPSADSALSLVHALEKNSSFSHTHHTLHALATVLAKAGRCSELKSLIDAIRANRFGTIRISFMNLMRWHAAAKDLDTVLQVWEQYTLVSNHLCTESYNIVMALYAQMKRDSEAVRVFQRMIDEGSLPNCRSCTIIIEHLVKSRKLSEALEVFNLLPLMRVKRTLKQYSVLLEGFVGSKRFDEVRILVHEMQVDGILPSRGVSLLLQQMKEEGILEDKEQLLRGILPDERIRSVSYSIDSGDEAEDENENEGEDENINDASQCDLVDGVHLKPWLDPRALVSALRNWNPEEVAALEGANFLWTTRLICKMLRNFKTPEAAWSFFCWVANQSGFIHDIYTVQRIMTLLARHGRTDLVNTLISKIRMEGMRLPFSTIRLIIDFYGISKNADAAMKVFNDDRILCGPISNVNLMLLYSSLLRTLVKCGRNSDALDMLDDMILNGICPDIQTFSGLMLYFSQLGDIKTVQKLFAMVRQSGLEPDAYLFKVLIQGYCKSNRAALAWRLFEDMKNSGLLPDSATKELLVKSLWKEGRRREAAAVEESCEEINTVLPLALQGHAWTVSSADLTRVYNIYSNSFA* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02470 660 PANTHER OS01G0167750 PROTEIN 3 659 IPR044175 -
Phac2g02470 660 Pfam PPR repeat 497 525 IPR002885 -
Phac2g02470 660 Pfam PPR repeat 215 238 IPR002885 -
Phac2g02470 660 Pfam PPR repeat 251 279 IPR002885 -
Phac2g02470 660 Pfam PPR repeat 180 208 IPR002885 -
Phac2g02470 660 Gene3D Tetratricopeptide repeat domain 381 486 IPR011990 GO:0005515
Phac2g02470 660 Gene3D Tetratricopeptide repeat domain 176 304 IPR011990 GO:0005515
Phac2g02470 660 Gene3D Tetratricopeptide repeat domain 61 175 IPR011990 GO:0005515
Phac2g02470 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 563 597 IPR002885 -
Phac2g02470 660 NCBIfam pentatricopeptide repeat 180 213 IPR002885 -
Phac2g02470 660 NCBIfam pentatricopeptide repeat 497 529 IPR002885 -
Phac2g02470 660 NCBIfam pentatricopeptide repeat 567 599 IPR002885 -
Phac2g02470 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 493 527 IPR002885 -
Phac2g02470 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 247 281 IPR002885 -
Phac2g02470 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 528 562 IPR002885 -
Phac2g02470 660 Pfam PPR repeat family 562 609 IPR002885 -
Phac2g02470 660 Gene3D Tetratricopeptide repeat domain 492 650 IPR011990 GO:0005515
Phac2g02470 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 177 211 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02470 415 645 Glycosyltransferase AT1G05670 27.897 3.85e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02470 - - gmx:100779372 1074.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02470 2 26128028 26130719 Phac2g02470 2 26128028 26130719 ECH