Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02231 ATGTGTTTCTCACTCTCTTCACCCGCTAAGTCCGCAGAGGGGCCAATGGAGGTTTCTCCCGCAACCAATTTCTTTCCCGAACCTCTATGTCCCTCAGAATCGGTCGGCGGTTGTTGCGATCATTCTGGTCAGTTATCGGCCGTCGGCCAATCTACTCTTCCGGTGGGTTACGGTGTTGGCGGGGAGGGCGCTGACCAAGAAGATTCTAATACGGCCTCGCAATTCCGGCAGCTCAACAACGATTCGACTTTGCCCTTGGCTTCGTGTTCACCGGTCTCGGCGGTGGCGCCGGAATCTTGGGTTACTACCCAAGGGAACTGGCTCTTAGACGAGAACGAGGGTTCAATGGGTGCAGAATCTATCTATGAATTTTGGCCTTCTAACATGGGAGCAGGGCTTTCGAATCTTGGCAATACATGTTTTCTTAATGCTATTCTGCAATGCTTTACACATACAGTGCCTCTAGTGCAGGGTATTCGTGCGTGTACTCATAATTTCCCTTGTGCTGGTCATATGGATCGCTTCTGTGTTATCTGCACTTTTCGTGACCAGGTTGAACGTTCTTTGGCTGCTTCTGGACGGACTCTCTCACCTTTGAAATTTGTGAACAATTTGAGCTATTTTTCTTCTGGATTTAGAAGATATCAGCAGGAGGATGCCCATGAATTCATGCAGTGTGCCTTAGATAAACTGGAAAGGTGTTTCCTAGATTTGAAGAAGACTGATATAAATTTTGAAGGGGATAATCTTGTACAGAAAGTATTTGGAGGTCGTCTCATTAGCAAACTTCAATGTTGTAGCTGTGGTCGCACTTCAGACACTTATGAGCCATTAATTGACATGAGTTTAGAGATAGAAAATGTAGATTCTCTTCCAAGTGCTCTGGAATCTTTTACTAAGGTTGAAAAGATTGATGCAAACTTTAGATGTGATAGCTGCAAGGAAGAAGTGTCCATGGAGAAACAGCTTATGTTGGATATGACACCGTCAGTTGCAGCATTTCATTTAAAGAGATTTAAGGCTGATGGGATTCTTGTTGAGAAGATTGATAAGCATATTGATTTCCCATTGGAGTTAGACTTGCAGCCTTACACCATTTCTAATCAAAACAATGACGTACTGATGAAATATGATTTATATGCCATTGTTGTGCATACTGGTTTTTCTTCTACTTCAGGGCATTACTTCTGCTTTGTTCGCTCTGGTCCAGACACATGGCACAAGTTGGATGATTCGATGGTTACTGAGGTATCAGGAGACTCTGTATTGTCTCAGGAAGCGTACATACTGTTTTATGCAAGACAGGGTACTCCGTGGTTTTCTAGTATAATGGAATCTCAAAAACAATGCCTGGATCCAAATATTTCAAGTACATCTCCTACATCTGTTTTAGACGTTGGTGATGGCATATCTAAATCAAATCCTAATTTAATTCCAAGTACTGAAAGAGGTGGGGCTGGTGAATCCAAAGGATGTTCTGAGCCTCAGTTTGATTATTTTATTCCAGACGAACGCACTTTTACTGAAAAAAATGACGATAAAGATGCTACTCATAGCTGTGGACAATTTCTCTGCGGGCCAAATCAGGAAAGCGTTTATTTCCATAGCAGCTCTAAAGATGTTGAAACCCAAAAGTTGTTCAGGAACAGGGTGACCTTGGATGGTCGTTCCATGTTTGATGGAAAATCATATACTGAGAATGCTAGTCTTGATAATAACTATGACTGTGAGGAAGTTGTTGATTTTAGAGAGAGTGCTGGTGCTTGTTCATTATCTCTGCCTCCGCCTCCGCCCACCTCCCCTCTTGATAATACTTTAGATAAATTTCGTACCTCACGTGATAATTCGAAGAAGGAGAGCAAGCAGAGCCGTAAAAGACTACTCAATCAGTGTAACGAGAATCCTGAACGACGAGAAGCTGTGAAATATCTTAATAAGACTGGTCCAAGGAGAGAGGCACTATTAAAATATGTTGCTCGGGATGAAGTTTCAGACAAGAGAAGAAAAATGGATTCATTGCAGTGTAAGAAAACCACATCCCTTGATCGCAAAAAATCAAACCAAACATCTGTCAGCCGCCCTGTGGCAGCTGGAATTTCACAGTGA 2106 0.4269 MCFSLSSPAKSAEGPMEVSPATNFFPEPLCPSESVGGCCDHSGQLSAVGQSTLPVGYGVGGEGADQEDSNTASQFRQLNNDSTLPLASCSPVSAVAPESWVTTQGNWLLDENEGSMGAESIYEFWPSNMGAGLSNLGNTCFLNAILQCFTHTVPLVQGIRACTHNFPCAGHMDRFCVICTFRDQVERSLAASGRTLSPLKFVNNLSYFSSGFRRYQQEDAHEFMQCALDKLERCFLDLKKTDINFEGDNLVQKVFGGRLISKLQCCSCGRTSDTYEPLIDMSLEIENVDSLPSALESFTKVEKIDANFRCDSCKEEVSMEKQLMLDMTPSVAAFHLKRFKADGILVEKIDKHIDFPLELDLQPYTISNQNNDVLMKYDLYAIVVHTGFSSTSGHYFCFVRSGPDTWHKLDDSMVTEVSGDSVLSQEAYILFYARQGTPWFSSIMESQKQCLDPNISSTSPTSVLDVGDGISKSNPNLIPSTERGGAGESKGCSEPQFDYFIPDERTFTEKNDDKDATHSCGQFLCGPNQESVYFHSSSKDVETQKLFRNRVTLDGRSMFDGKSYTENASLDNNYDCEEVVDFRESAGACSLSLPPPPPTSPLDNTLDKFRTSRDNSKKESKQSRKRLLNQCNENPERREAVKYLNKTGPRREALLKYVARDEVSDKRRKMDSLQCKKTTSLDRKKSNQTSVSRPVAAGISQ* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02231 701 MobiDBLite consensus disorder prediction 468 492 - -
Phac2g02231 701 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 81 435 - -
Phac2g02231 701 Pfam Ubiquitin carboxyl-terminal hydrolase 132 432 IPR001394 GO:0004843|GO:0016579
Phac2g02231 701 MobiDBLite consensus disorder prediction 588 639 - -
Phac2g02231 701 FunFam Ubiquitin carboxyl-terminal hydrolase 20 127 438 - -
Phac2g02231 701 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 131 435 IPR028889 -
Phac2g02231 701 SUPERFAMILY Cysteine proteinases 129 434 IPR038765 -
Phac2g02231 701 Gene3D Cysteine proteinases 127 442 - -
Phac2g02231 701 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 377 395 IPR018200 GO:0004843|GO:0006511
Phac2g02231 701 MobiDBLite consensus disorder prediction 659 683 - -
Phac2g02231 701 MobiDBLite consensus disorder prediction 684 701 - -
Phac2g02231 701 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 132 147 IPR018200 GO:0004843|GO:0006511
Phac2g02231 701 MobiDBLite consensus disorder prediction 607 639 - -
Phac2g02231 701 MobiDBLite consensus disorder prediction 659 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02231 Phac-Chr2 24060643 24064931 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02231 132 434 Miscellaneous Gene Families AT2G24640 35.144 6.22e-52 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02231 K11855 - gmx:100808015 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02231 2 24060643 24064931 Phac2g02231 2 24060643 24064931 ECH