Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02161 ATGCTTTGCAAATTCTTTTGTCTTCTCAGATGCCGAGATCATTGGCACATTGTTGGAACATCATATGACTTTATATCACACCCTTCTTCTTTCTCTCTCTCTTTCCTTTTCCCCACCGTAAAAGCTGTCGTCAATTCGGTAAAAGCACCAAACACACCTCTGCTTCGTTCCCTCACCAAACTCCCAAAACCAACTCTGAAGTTTGAAGTTCAAGCACAGTTTAAGGTTTTGAAAATTGGTGTCTGTGTTGGACTCAGTCCTGTTTCCTCCCTCTGTAGAGAGAGGTTGACACTTGACGGCGTCAGACACGCGCTTGGTTCTGTAGTGTTGTTCATTACCATGGCTTCTAAATTCAAGCATGGATCCTCTATGGTTCGGAATATCACGCAGTTGAGCAATGATTTGGACCAGGAGGGTGAGAATGGGAGTGTTGGCCTTGCTACCTACACAGTTCATATTCCTCCGACGCCCGATAACCAGCCTATGGAGATTTCTCTGGAGAGGTCGAGTTCTCGGAGAGCGGAGGATCAATACGCTTCTAGTTCTTTGTTCACCGGTGGTTTTAACCAGCTCACACGTGCCCATTTGAAGGACAAGGTGATTGAGTCCGAATCCAGCCACCCCCAGATGACTGGTGCAAAAGGGTCCTCTTGCGCAGTGCCTGGGTGTGATGGAAAGGTCATGACTGACGAAAGAGGGTTGGATGTAGTCCCTTGTGAATGCGATTACAAGATTTGTAGGGATTGTTACAGAGATGCTTTGAGGGCTGGTGAGGGGATTTGCCCTGGTTGCAAGGAGCCGTACAACGAGCCTGAGATGAAATCACAGGCACTGCCTTTGCCTCCTAGTGCTAGGATTAATAAGATGGAGAGGAGGTTGTCGTTGATGAAATCAGGGACGTTGACGAGGAGCCAGACTAATGAGTTTGATCATTCTCAGTGGTTGTTTGAAAGCAAGGGGAGTTATGGATATGGGAATGCTATGTGGCCTAAAGAGTCTGAACCTGATGCCAGTTCTGTATCTGGTTCTGATTGGATGGGGGGCGACCCTAATGTATTCAATGAAAAGCAGTGGAAGCCCTTGACCCGGAAATTGAGTATCTCTGCTGCAATTCTCAGTCCTTATCGGCTCATTATATTTGTGCGGCTAGTGATTCTAGTTTTCTTTCTAAAGTGGAGGGTCCAAAACCCCAATGATGATGCAATCTGGCTGTGGGGCATGTCTGTGGTTTGTGAAATCTGGTTTGCCTTCTCCTGGGTGCTTGACCAGTTTCCTAAGCTCTTCCCCGTAAATCGTTTTGCTGATCTTGATGTTTTGAAAGAGAAGTTTGAGACTCCTAATTCCGCCAATCCTACTGGGAAGTCTGATCTTCCGGGAGTAGATATGTTTGTGTCAACTGCTGATCCAGAAAAAGAACCACCACTTGTTACTGCCAATACCATTCTTTCTATTCTAGCTGCTGATTATCCTGTTGAGAAACTCTCATGTTATGTCTCTGATGATGGTGGTGCGCTCCTAACTTTTGAGGCCATGGCAGAGGCTGCAAGTTTTGCAAATTTGTGGGTTCCCTTTTGCCGGAAGCATGAGATTGAACCCAGGAACCCAGAATCTTATTTTAATCTCAAGAGAGACCCCTACAAGAACAAAGTGCGCTCTGACTTTGTGAGGGACCGCAGACGAGTAAAGCGTGAGTATGATGAGTTCAAGGTTCGGATTAATGGCCTTCCTGATTCAATCAGGCGGCGCTCTGATGCTTATAATGCTAGTCAAGAAATCAAAGCCATGAGGAAACATAGAGAGAATGGAAATGAAGAACCAATGGAGAATTTAAAAATTCCTAAAGCTACATGGATGGCTGATGGTACTCACTGGCCTGGCACTTGGACAAATGCTGCGCCAGAGAATTCCAGGGGTGATCATGCCAGTATCATACAGGTAATGTTAAAACCCCCAAGTGATGAACCACTGACTGGCACCGCATCAGATTCAAATGCCTTGGATTTTACTGAAGTTGATATTCGTCTTCCTATGCTTGTCTATGTTTCTCGTGAAAAACGACCCGGCTATGATCACAACAAAAAGGCTGGGGCCATGAATGCCCTAGTTCGAGCCTCAGCCATAATGTCCAATGGCCCTTTCATTCTCAATCTTGACTGTGACCATTACATATATAACTCTCAGGCGCTGAGAGAAGGAATGTGCTTCATGATGGACCGTGGTGGAGACAGGCTCTGCTATGTCCAATTTCCTCAAAGATTTGAAGGGATAGACCCCAATGATCGCTATGCCAATCACAACACTGTCTTCTTTGATGTCAATATGCGTGCTCTTGATGGAATTCAAGGTCCTGTATATGTTGGCACAGGATGCCTATTTCGAAGAACTGCTCTCTATGGCTTTGATCCACCCCGGAACAAGGAAGAGACCGGTTGGTTTGGTAGAAAGAATAAGAAATCTTCAACAGTGGCATCGGTTTCTGAAGCTGGTTCTGAGGAACAGTCATTGAGGAATAATGACATTGAGGATGAAGAAATGATGACTGCTTTTGTTCCCAAGAAATTTGGCAACTCCAGTCTTCTTGTTGATTCAATCAGGGTGGCTGAGTTCCAGGGGCTACCCCTTGCTGATCATTCATCCATCAAATATGGACGTCCACCCGGTGCTCTAACACTCCCTCGGGATCCTCTTGATGCTGCTACCGTTGCTGAGGCCATCAATGTCATCTCATGCTGGTATGAGGACAAGACTGAATGGGGCCTTAGAATTGGATGGATTTACGGGTCAGTTACTGAAGATGTTGTGACAGGTTATAGAATGCACAATAGAGGATGGAGGTCTATATATTGTGTGACCAAAAGGGATGCATTCCGTGGCACTGCTCCAATCAATCTCACAGACAGGCTTCACCAGGTTCTTCGGTGGGCAACAGGCTCAGTCGAGATCTTCTTTTCACGCAACAATGCTCTGTTGGCCAGCTCTAGATTGAAATTTCTACAGCGGATTGCTTACCTCAATGTTGGAATCTACCCTTTCACTTCCATCTTCCTTATTGTGTATTGCTTCCTTCCTGCTCTTTCACTTTTCACTGATCAGTTCATTGTTCAAAGCCTTCAAGTCAACTTCCTAGTTTACCTCTTGGGAATAACCTTGACCCTTGTCATCCTTGCTGTTTTGGAGATCAAGTGGTCTGGCATTGCGCTTGAAGAGTGGTGGAGGAATGAACAGTTTTGGTTGATTGGAGGCACTAGTGCTCATCTTGCTGCTGTGCTTCAGGGTCTGCTAAAGGTGATGGCTGGCATTGAGATTTCATTCACTCTGACATCAAAATCTGCCGGTGATGACGAAAATGATGAATATGCTGATCTCTATGTCCTCAAGTGGACATCTCTTATGATACCACCAATCACAATCATGATGGTTAATTTGATAGCCATTGCTGTGGCAGTTAGCAGAACTATATACAGTGAGGATCGTCAATGGAGCAGTTTGCTTGGAGGTGTGTTTTTCAGCTTTTGGGTTTTGGCTCATTTGTATCCCTTTGCAAAAGGGCTAATGGGTAGAAGGGGTAGGACACCCACTATAGTGTTTGTATGGTCAGGTCTAATATCAATCACTATCTCACTCCTTTGGGTTGCTATTGACCCTCCCTCTGGTAGCAGCAGTCAAATTGGAGGGTCATTCCAATTCCCTTGA 3693 0.4555 MLCKFFCLLRCRDHWHIVGTSYDFISHPSSFSLSFLFPTVKAVVNSVKAPNTPLLRSLTKLPKPTLKFEVQAQFKVLKIGVCVGLSPVSSLCRERLTLDGVRHALGSVVLFITMASKFKHGSSMVRNITQLSNDLDQEGENGSVGLATYTVHIPPTPDNQPMEISLERSSSRRAEDQYASSSLFTGGFNQLTRAHLKDKVIESESSHPQMTGAKGSSCAVPGCDGKVMTDERGLDVVPCECDYKICRDCYRDALRAGEGICPGCKEPYNEPEMKSQALPLPPSARINKMERRLSLMKSGTLTRSQTNEFDHSQWLFESKGSYGYGNAMWPKESEPDASSVSGSDWMGGDPNVFNEKQWKPLTRKLSISAAILSPYRLIIFVRLVILVFFLKWRVQNPNDDAIWLWGMSVVCEIWFAFSWVLDQFPKLFPVNRFADLDVLKEKFETPNSANPTGKSDLPGVDMFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPESYFNLKRDPYKNKVRSDFVRDRRRVKREYDEFKVRINGLPDSIRRRSDAYNASQEIKAMRKHRENGNEEPMENLKIPKATWMADGTHWPGTWTNAAPENSRGDHASIIQVMLKPPSDEPLTGTASDSNALDFTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSQALREGMCFMMDRGGDRLCYVQFPQRFEGIDPNDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRNKEETGWFGRKNKKSSTVASVSEAGSEEQSLRNNDIEDEEMMTAFVPKKFGNSSLLVDSIRVAEFQGLPLADHSSIKYGRPPGALTLPRDPLDAATVAEAINVISCWYEDKTEWGLRIGWIYGSVTEDVVTGYRMHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFTDQFIVQSLQVNFLVYLLGITLTLVILAVLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVMAGIEISFTLTSKSAGDDENDEYADLYVLKWTSLMIPPITIMMVNLIAIAVAVSRTIYSEDRQWSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLISITISLLWVAIDPPSGSSSQIGGSFQFP* 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02161 1230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 201 280 IPR013083 -
Phac2g02161 1230 FunFam Cellulose synthase-like protein D3 201 279 - -
Phac2g02161 1230 Pfam RING/Ubox like zinc-binding domain 220 269 - -
Phac2g02161 1230 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 661 814 IPR029044 -
Phac2g02161 1230 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 358 1199 - -
Phac2g02161 1230 FunFam cellulose synthase-like protein D3 665 802 - -
Phac2g02161 1230 SUPERFAMILY Nucleotide-diphospho-sugar transferases 475 813 IPR029044 -
Phac2g02161 1230 Pfam Cellulose synthase 460 1218 IPR005150 GO:0016020|GO:0016760|GO:0030244
Phac2g02161 1230 SUPERFAMILY RING/U-box 208 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02161 Phac-Chr2 23362317 23367464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02161 126 1230 Glycosyltransferase AT3G03050 75.022 0.0 1740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02161 K20924 - gmx:100813900 2007.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02161 2 23362317 23367464 Phac2g02161 2 23362317 23367464 ECH