Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02160 ATGGATCATAGGTTACGTTGTGTTGGGACAATACCCAAAGTTTCTTTTCTTTTGCTACTTTCTCTGCTTCTCTTCAGTTTCGTTGACGCAGCCTTCGACCTCGCTACTATACCCTTCAACGATGGTTATTCTACGCTCTTCGGAGATAGCAACGTTGTTCGCTCCGCCGATGGCTACGGCGTACAACTCCTCCTCGATCGCTTCACAGGTTCGGGTTTCATATCCTCTAATATGTACCACTATGGATTCTTCAGCGCCAGAATCAAGTTACCGTCGAATTATACTGCTGGTATTTGCGTGGCGTTTTATACATCAAACGGTGATGTGTTCGAGAAGTCACACGATGAGTTGGACTTCGAATTCCTCGGAAACATCGCCGGAAAACCGTGGCGGTTTCAGACGAACTTATACGGCAACGGGAGCACCAACCGTGGGCGTGAGGAGCGTTACCGTTTGTGGTTCGATCCAACGAAAGAATACCACAGATACAGCATCCTTTGGACAGCGAAGAACGTGATTTTTTACGTTGATGAAGTTCCAATCAGAGAAGTGTTACGAAGTGATCAAATGGGAGGTGATTACCCTTCGAAACCAATGTCACTGTATTCGACCATATGGGATGCATCAAATTGGGCAACATCTGGAGGTAAATACAAAGTAAACTATAAGTATGCACCTTTTGTGACGGAATTTAAGGACCTAGTCCTTAAGGGTTGCTCCGCCGACCCCATCCAAGAGATCTTCGATCTCAAAGGTTGCTCCGACCAATACGAGGATCTCGAGGCTCAAGACTACGCCGTCATCACTCCCACGCGCCGCCTGGCCATGCGCCGGTTCCGCCAGCGTTACATGTACTATTCATATTGCTATGATACATTAAGGTACAACGTGCCACCACCCGAGTGTGTCATTGTACCCTCGGAGAAACAGCGGTTTAAGGAGACCGGGAGGTTGAGATTCGGAGGAAGCCACCGCCGGCAATCACGGCGGAAGGGCCGCACTACAACTCCGGCGGTTGATACCGATGAGGGTGATATGTGA 1041 0.489 MDHRLRCVGTIPKVSFLLLLSLLLFSFVDAAFDLATIPFNDGYSTLFGDSNVVRSADGYGVQLLLDRFTGSGFISSNMYHYGFFSARIKLPSNYTAGICVAFYTSNGDVFEKSHDELDFEFLGNIAGKPWRFQTNLYGNGSTNRGREERYRLWFDPTKEYHRYSILWTAKNVIFYVDEVPIREVLRSDQMGGDYPSKPMSLYSTIWDASNWATSGGKYKVNYKYAPFVTEFKDLVLKGCSADPIQEIFDLKGCSDQYEDLEAQDYAVITPTRRLAMRRFRQRYMYYSYCYDTLRYNVPPPECVIVPSEKQRFKETGRLRFGGSHRRQSRRKGRTTTPAVDTDEGDM* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02160 346 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 267 302 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Phac2g02160 346 ProSitePatterns Glycosyl hydrolases family 16 active sites. 116 126 IPR008263 GO:0004553|GO:0005975
Phac2g02160 346 Gene3D - 27 302 - -
Phac2g02160 346 Pfam Glycosyl hydrolases family 16 41 223 IPR000757 GO:0004553|GO:0005975
Phac2g02160 346 CDD GH16_XET 35 302 IPR016455 GO:0010411|GO:0016762|GO:0042546
Phac2g02160 346 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 38 302 IPR044791 GO:0004553
Phac2g02160 346 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 30 231 IPR000757 GO:0004553|GO:0005975
Phac2g02160 346 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 304 IPR013320 -
Phac2g02160 346 PIRSF EndGlu_transf 5 307 IPR016455 GO:0010411|GO:0016762|GO:0042546
Phac2g02160 346 MobiDBLite consensus disorder prediction 317 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02160 Phac-Chr2 23352661 23356256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02160 16 324 Glycoside Hydrolase AT1G32170 70.645 2.22e-164 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02160 K08235 - gmx:100786236 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g02160 2 23352661 23356256 Phac2g02160 2 23352661 23356256 ECH