Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01841 ATGCGGCTTGCACTTGTGCGTCCAAATATTAACTTCAAAGTTGTTGATATTGAAAGAGAGGATGAACTGTTCTGCACACATTCTGCTTCTTCTCCTCTGTCACTTGTAACCAGTGGCTTTGGGGTAGAGGTCACAAGCTCTCTTCATTATTTAGAAGTTGAAAATGATATCATAAAGCTCTCTGGATATATATCCAATCCTTGCAATACTTTAAATATGAAGGTCCTGCAGTATATCTATGTTAACTCACAATTTGTTTGCAAAGGCCCAATTCATAAGCTTCTGAATCAACTGGCTATCAGGTTTGAACATCTGAAATCATGGAATACTGATAATGAGTTCCGAAACAAGAAGAGAAGCAGGTGTCAGGCGGGTCCAGCTTATCTCTTGAATTTAAGTTGCCCCCGATCTATGTATGATTTGGCCTTTGAGCCATCAAAAACGTATGTTAAATTCAAGGATTGGACACCTATTCTAAATTTCATTGAGAAGGTCATCAAACAATTCTGGGAGGAAAACATAGCTTCTGTAGAGCCCTCCATTCAAGCTGCATACATGGTAGAAGATCAACAAGAGAAAGCATATGTCAACATCATTTCAGACGTATCAGATATATCGAAGTTTAGAAACCAAAATCGTAAGGATTGCCTAGATCTATTCTTTTCTACGTCGGACAAGCTAATTGAAGATAACTATCATCAATCTAACAGGGAAGATGTTAGAACCTCCATTGATTACATGGAGGCCGCGATGTTCAAAGAGAAACAAAGTATTGGAGACTCTCTTTTTCAGACTGGTTATTCGGGCAACTTATTGGATGATGATTCACATGCCAAGTGCATATCCACTGTGACAAGAAGGCCAAACAGTTTGCTGATGCGTGATAGCAGCAGTTCATTGGAAGGAGATAACCTTTTTTATGGTGAAATACCAGCTATAGAAAGTTTAAATGATTGTGTACTTTTTCATGCACCGAGTTCTTCACATGGAAGAAAATTCCATAAAGAAGCTGATGTGAACAGTGAAACATTTCAAGATGATTTACATTTTAACTGCAATGGGTACAGTTTTGATGTAAATATTAATGGGGATTTGCAGAAATCTTTTCTAAAGGGATGCTCTACTCTAGGAAGTATCCTGCACAAGAAAGATTTCTTTGTAAATGATGAATATGAAATCCAAACTGATAGCTTTTGTAGCAAGCGGAATACAGAGGAGGATTGTATAAGTGGTAAGGATTTAAATGATGTACCTTTTGGTGAACCAAGTTCTTCACATGGAAGAAAATTCCATAAAGAAGCTGATGTGATCAGTGAATCATTTCAAGATGATTTACACTATAACTACGATGGGTACAGTTATGATGTAGATATTAATGGGGATTTGCAGAAACCTTTTCTAAAGGGATGCTCTACACTAGGAAGTATCCTGCCTAAGAAAGATTTCTCTGTAAATGATAAATATGAACTCCAAACTGATAGCTTTTGTAGCAAGAAGAATACAGTGGAGGATTATAGAAGTGGTAAGGATTTATATGTACATCCCTATCCAGAAGTAAAAAAAAAATTAAAGATGTCAAAAAATTCCGGTTTTCTTGAAAGAGAATTGGCTGAAGAAAACTGTCTCCCTTCAGATTTATGCTACTCAGCATCAAGAATAGGAAGCTCTGGGTCAGATGATCTGTCATCCAATTTTGAATGGCATCCTCTCTACCCAAAACCCTCATCCCAAGCACATGCACTGGGTTTTTATCGTACAAATGATATTAAAGATGATCTTGGAGGAGAATCTAGATGCTTTAAATGGGTCCATCATAAAAAACGTTTAGATGAAAGAGAAAATGAGTTCAATTTCAGCTACAATATGTCATGGAATACCAACCAGCATCACTCTGCATCAAGTTATGCAAATATAGGATTTAATTTTGATGTTGCTGGTGATTCTGGTGAAATATTCAACAAACTAGTTGACTGCCCTGATTTTAGTGACATATATTCTACAAAAAGGTCAGATATGTTAAACAAGGAGCTAGACTGGCTGTTGCCAAAGTCATGTGTTAAAAGCTGCAAGAGGCCTAACAAGAACAAAGGCAAAACAGATCAATTTAGAAATTCAATTTTGGAGGAAAATCATGAAAGATCTAGAAGAAGCATTTCAGCTCCTCCTTTTTATAGAAGCAAAAGGAGGTTTTTCTCTTTAAATCATCCTTCAGAAATAAAAGCCAAAAGACAGATTGACCGAGTGTATAACCCTGCTTTCAATCATGGAGAAGCTAGTAATTCTAAATATCATCAACAGCCTCCTGTTGCTCATCACCAAAGCACTAAAGATCTCTTATTACAAGAATTCAAAATCAATGTGAAACAAACTTCAGAGGTTCTGGGTGCTATGCAGGTTAATGACATAACAGAGATTGAAGAACTTGAGAGTTTCAACATTCAAAACAGTGCTCCAATTGGGGAATTGTGCTCTAAGGATGTGCAAGATTCCATAGATTTTGGAACTAAGTGGAGGAATTGCTCACCTAATATTACAAAGAATGATAAACCGGCTAATATTGAATGTCGAAACAATATACTAGACATTTCTTCTGGATTCTTGCATCTTGCCGGAGATTCATTGATTCCTGAAACTATCAGTAAGAAATGTCTGGAGGATTCTAAAGTTTTGCATCAGGTGGATAAAAAATTCATTCCAGTTGTGGCTGGCAGAACCCTTGCTGTTATTGATCAGCATGCAGCAGATGAAAGAATCAGACTGGAAGACTTGCGTCAAAAGGTATTGTCAGGAGAAGCAAAAACAGTAACCTATCTACATGCTGAACTGGAACTGGTACTGCCAGAGATTGGTTATCAACTACTTCATAGTTATAGCGAACAGATTAAAGATTGGGGCTGGATCTGCAACATTCATGCTAAAAATTCCGAGTCCTTTAGAAGGAATTTGGATATTATAAAAAGACAACAAACGACCATCACACTTATTGCGGTACCGTGTATTTTAGGGGTCAAATTAAATGATGCTGATCTTTTAGAATTTCTTCAGCAGCTTGCTGACACTGATGGATCGTCAACAATGCCACCCTCTGTCATACGAGTGTTAAATTCGAAGGCATGCAGAGGTGCAATTATGTTTGGGGATTCATTGCTACCATCAGAATGTTCCCTTCTAGTTGAAGAGCTAAAGCATACATCGCTTTGTTTCCAATGTGCTCATGGGCGACCAACAACTGTTCCTCTAGTTAATTTGGAGGTACTGCATAATCAGATAGCCAAGCTTCGACTGATGAACGAGTCTTCAAGTGACGAGTGGCATAGATTACATAAACATAAAGTATGCGTTGAACGTGTAGTACAACGTTTAAATCCTGCTAGTGGAACTTGA 3384 0.375 MRLALVRPNINFKVVDIEREDELFCTHSASSPLSLVTSGFGVEVTSSLHYLEVENDIIKLSGYISNPCNTLNMKVLQYIYVNSQFVCKGPIHKLLNQLAIRFEHLKSWNTDNEFRNKKRSRCQAGPAYLLNLSCPRSMYDLAFEPSKTYVKFKDWTPILNFIEKVIKQFWEENIASVEPSIQAAYMVEDQQEKAYVNIISDVSDISKFRNQNRKDCLDLFFSTSDKLIEDNYHQSNREDVRTSIDYMEAAMFKEKQSIGDSLFQTGYSGNLLDDDSHAKCISTVTRRPNSLLMRDSSSSLEGDNLFYGEIPAIESLNDCVLFHAPSSSHGRKFHKEADVNSETFQDDLHFNCNGYSFDVNINGDLQKSFLKGCSTLGSILHKKDFFVNDEYEIQTDSFCSKRNTEEDCISGKDLNDVPFGEPSSSHGRKFHKEADVISESFQDDLHYNYDGYSYDVDINGDLQKPFLKGCSTLGSILPKKDFSVNDKYELQTDSFCSKKNTVEDYRSGKDLYVHPYPEVKKKLKMSKNSGFLERELAEENCLPSDLCYSASRIGSSGSDDLSSNFEWHPLYPKPSSQAHALGFYRTNDIKDDLGGESRCFKWVHHKKRLDERENEFNFSYNMSWNTNQHHSASSYANIGFNFDVAGDSGEIFNKLVDCPDFSDIYSTKRSDMLNKELDWLLPKSCVKSCKRPNKNKGKTDQFRNSILEENHERSRRSISAPPFYRSKRRFFSLNHPSEIKAKRQIDRVYNPAFNHGEASNSKYHQQPPVAHHQSTKDLLLQEFKINVKQTSEVLGAMQVNDITEIEELESFNIQNSAPIGELCSKDVQDSIDFGTKWRNCSPNITKNDKPANIECRNNILDISSGFLHLAGDSLIPETISKKCLEDSKVLHQVDKKFIPVVAGRTLAVIDQHAADERIRLEDLRQKVLSGEAKTVTYLHAELELVLPEIGYQLLHSYSEQIKDWGWICNIHAKNSESFRRNLDIIKRQQTTITLIAVPCILGVKLNDADLLEFLQQLADTDGSSTMPPSVIRVLNSKACRGAIMFGDSLLPSECSLLVEELKHTSLCFQCAHGRPTTVPLVNLEVLHNQIAKLRLMNESSSDEWHRLHKHKVCVERVVQRLNPASGT* 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01841 1127 SMART MutL_C_2 889 1049 IPR014790 GO:0005524|GO:0006298
Phac2g01841 1127 Pfam MutL C terminal dimerisation domain 888 1049 IPR014790 GO:0005524|GO:0006298
Phac2g01841 1127 Gene3D - 892 1080 IPR042120 -
Phac2g01841 1127 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 2 1084 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Phac2g01841 1127 SUPERFAMILY DNA mismatch repair protein MutL 888 1080 IPR037198 -
Phac2g01841 1127 FunFam MUTL protein homolog 3 933 1044 - -
Phac2g01841 1127 SMART DNA_mis_repair_2 36 171 IPR013507 GO:0005524|GO:0006298|GO:0030983
Phac2g01841 1127 Pfam DNA mismatch repair protein, C-terminal domain 40 169 IPR013507 GO:0005524|GO:0006298|GO:0030983
Phac2g01841 1127 SUPERFAMILY Ribosomal protein S5 domain 2-like 21 171 IPR020568 -
Phac2g01841 1127 Gene3D - 39 177 IPR014721 -
Phac2g01841 1127 Gene3D - 933 1044 IPR042121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01841 Phac-Chr2 20568068 20578260 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01841 K08739 - gmx:100788019 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01841 2 20568068 20578260 Phac2g01841 2 20568068 20578260 ECH