Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01762 ATGGGGTCTCTCTGTGCCCCTCTATCTGCGATCATCGCAATTTGGTGTCTATTATTGGGTGCTGAATCGAAGACACATTGGGGAGATGCAGAGGTTCTCAAGGAGTTAAAGCAAGGTTTGGAACAAGCTTCGGTGATCCCAGGCTCTTGCGTCAGTTCCTGGGACTTCACCCTCGACCCCTGCGACAACCTATTCGCCGACAAATTCACGTGCGGCTTCAGATGCGACGTCGTCGTTTCAGGCCTTAGTCGAGTCACTGAACTTGCGCTAGACCAAGCGGGTTATGTTGGCTCTCTCACCTTCACGTGGAACCTTCCTTTTCTACAAACACTCGATCTCTCCAAAAACAACTTCTCCGCCCAAATTCCTGATTCCTTTTCAAACCTAACTCGCCTCCGCCGACTCAGTCTCTCGTCGAACTCCTTCTCCGGCGAGATACCCCCTTCCCTCGGAACACTCCCCAGCCTCGAAGAGCTTTACCTCGACAACAACAACCTACAAGGAACAATCCCACAAGGCTTCCACAACCTTAAAAGACTCGAACTCCAATCCAACAATCTCAACACCCACCTACCAAACTTTGACACCTTCACAAACCTTAAATACCTCGATTTCAGCGATAACTCCATCGCGGGAGAGTTACCGGCCTCGCTCCCTGTCTCGCTGGTTCAGATATCAATTCGGAACAACAATTTAAACGGTGTCTTATCGAGTGAAAGCTTCAGGAATTTGAAGAGGTTGCAGGTGGTGGATTTCAGCTCCAACCGAATGAATGGTTTAATTCCTTCGGTTTTCTTCGAGCTTCCGTCGTTGCAGCAGTTGACGCTGTCCTTCAACGAGTTCACGAAGGTTGAAGCACCTTATAAGGGAGTGGAGTCGCGGAGCAGACTTATAGCGGTTGATTTGAGCAACAACAGGCTTGAGGGGTTTTTGCCGTCATTCATGGCGATGATGCCGAAGTTATCGTCGTTGTCCTTGGAGAATAACGAGTTCACAGGGCGAATAGCGACCCAGTTAGCGGAGAAAACGGTGTCTCCCAAAACGGGAGTGACTCCGTTGGAGAGGCTTCTGTTGAGGGGGAATTACTTGGTGGGAGGGATTCCTCGGCCATTGTTAACATTGAAACGCGATTCTGCGAACGTGAGTTTAGTGGATAACTGCTTGTACAGGTGTCCTCATACTTTCTTTTTCTGCCAAGGTGGACAACAGAAGTCATTGGCACAGTGTAACAGATTTGTCACAACTACTGAATAA 1254 0.4912 MGSLCAPLSAIIAIWCLLLGAESKTHWGDAEVLKELKQGLEQASVIPGSCVSSWDFTLDPCDNLFADKFTCGFRCDVVVSGLSRVTELALDQAGYVGSLTFTWNLPFLQTLDLSKNNFSAQIPDSFSNLTRLRRLSLSSNSFSGEIPPSLGTLPSLEELYLDNNNLQGTIPQGFHNLKRLELQSNNLNTHLPNFDTFTNLKYLDFSDNSIAGELPASLPVSLVQISIRNNNLNGVLSSESFRNLKRLQVVDFSSNRMNGLIPSVFFELPSLQQLTLSFNEFTKVEAPYKGVESRSRLIAVDLSNNRLEGFLPSFMAMMPKLSSLSLENNEFTGRIATQLAEKTVSPKTGVTPLERLLLRGNYLVGGIPRPLLTLKRDSANVSLVDNCLYRCPHTFFFCQGGQQKSLAQCNRFVTTTE* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01762 417 Pfam Leucine rich repeat 108 166 IPR001611 GO:0005515
Phac2g01762 417 Pfam Leucine rich repeat 222 280 IPR001611 GO:0005515
Phac2g01762 417 Pfam Leucine Rich Repeat 199 218 IPR001611 GO:0005515
Phac2g01762 417 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 14 410 - -
Phac2g01762 417 SUPERFAMILY L domain-like 70 403 - -
Phac2g01762 417 Gene3D Ribonuclease Inhibitor 290 393 IPR032675 -
Phac2g01762 417 Gene3D Ribonuclease Inhibitor 195 289 IPR032675 -
Phac2g01762 417 Gene3D Ribonuclease Inhibitor 28 194 IPR032675 -
Phac2g01762 417 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 102 191 - -
Phac2g01762 417 SMART LRR_typ_2 105 128 IPR003591 -
Phac2g01762 417 SMART LRR_typ_2 244 267 IPR003591 -
Phac2g01762 417 SMART LRR_typ_2 153 176 IPR003591 -
Phac2g01762 417 SMART LRR_typ_2 268 289 IPR003591 -
Phac2g01762 417 SMART LRR_typ_2 129 151 IPR003591 -
Phac2g01762 417 SMART LRR_typ_2 318 346 IPR003591 -
Phac2g01762 417 SMART LRR_typ_2 197 221 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01762 Phac-Chr2 19769959 19771694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01762 79 412 Receptor kinase-like Gene Family AT3G28890 29.673 5.15e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01762 - - gmx:100811366 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01762 2 19769959 19771694 Phac2g01762 2 19769959 19771694 ECH