Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01552 ATGGGGCACGACCAGAACCAGAGATCTCTGATCTACGCGTTCGTCTCTCGCGGCACCGTGATTCTTGCCGAGTACACTGAATTCAGCGGCAACTTCAACACCATCGCTTTTCAGTGCCTCCAGAAGCTCCCTGCCTCCAACAATAAATTCACCTACAACTGCGACGGCCACACCTTCAATTACCTAGTCGACAACGGATTCACGTATTGTGTTGTTGCGGATGAGTCGATTGGGAGACAGGTGCCTGTGGCTTTTCTGGACCGCGTGAAGGATGATTTTCTTGCCAAGTACGGCGGCGGGAAGGCGGCGACAGCAGCCGCCAACAGCCTGAATAAGGAATTCGGGTCCAAGTTGAAGGAGCATATGCAGTACTGTGTTGAGCACCCTGAAGAGATAAGCAAGCTTGCTAAGGTGAAAGCTCAGGTTTCTGAAGTTAAAGGTGTCATGATGGAGAACATTGAGAAGGTTCTGGACAGAGGGGAAAAGATAGAGCTTCTGGTAGACAAGACTGAAAATCTTCATCACCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATCCGTAGAAAAATGTGGCTGCAAAACATGAAGGTAAAGCTGATTGTGTTGGCAATTTTGATAGCCCTGATCCTCATAATAGTCCTCTCTGTTTGCCGTGGGTTCAATTGTGGAAAAAATTAA 681 0.4816 MGHDQNQRSLIYAFVSRGTVILAEYTEFSGNFNTIAFQCLQKLPASNNKFTYNCDGHTFNYLVDNGFTYCVVADESIGRQVPVAFLDRVKDDFLAKYGGGKAATAAANSLNKEFGSKLKEHMQYCVEHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKVKLIVLAILIALILIIVLSVCRGFNCGKN* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01552 226 SUPERFAMILY SNARE-like 10 125 IPR011012 -
Phac2g01552 226 SUPERFAMILY SNARE fusion complex 129 196 - -
Phac2g01552 226 CDD Longin 11 125 IPR010908 -
Phac2g01552 226 ProSitePatterns Synaptobrevin signature. 152 171 IPR001388 GO:0016020|GO:0016192
Phac2g01552 226 ProSiteProfiles v-SNARE coiled-coil homology domain profile. 134 194 IPR042855 -
Phac2g01552 226 PANTHER SNARE PROTEINS 7 219 - -
Phac2g01552 226 Gene3D - 132 218 - -
Phac2g01552 226 PRINTS Synaptobrevin signature 139 158 IPR001388 GO:0016020|GO:0016192
Phac2g01552 226 PRINTS Synaptobrevin signature 195 214 IPR001388 GO:0016020|GO:0016192
Phac2g01552 226 PRINTS Synaptobrevin signature 159 178 IPR001388 GO:0016020|GO:0016192
Phac2g01552 226 FunFam Vesicle-associated membrane protein 726 132 218 - -
Phac2g01552 226 ProSiteProfiles Longin domain profile. 14 118 IPR010908 -
Phac2g01552 226 Pfam Synaptobrevin 133 218 IPR042855 -
Phac2g01552 226 SMART Longin_2 35 117 IPR010908 -
Phac2g01552 226 FunFam Vesicle-associated membrane protein 722 5 131 - -
Phac2g01552 226 Pfam Regulated-SNARE-like domain 38 114 IPR010908 -
Phac2g01552 226 CDD R-SNARE 134 192 - -
Phac2g01552 226 Gene3D Longin domain 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01552 Phac-Chr2 15078710 15084416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01552 7 223 Miscellaneous Gene Families AT1G04760 80.184 3.27e-128 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01552 K08511 - gmx:100820382 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01552 2 15078710 15084416 Phac2g01552 2 15078710 15084416 ECH