Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01181 ATGGCCACCAACACTCATTTCATCCTTTCACTCCCACCACGTCACGCCTTTTCTTTTTCCTCTTCTTCTTTCCCATTTCTTCCAACAAACACCACACTCTCTTTCTCTCTCCTTCGCCTTCGATCCCTTCCTCTTTCCCTCAATTTCCGTGCCTCCTTCTCCTTCAAGTCCCCTACCTCAACCATTCGCGCATTCTCCGACGCCGAGGAGGACGACGAAGAAGATGATGATGATGAAGAAGAAGACGAAGATGAAGACGATGATGTTGCTGCCGACGAATACGACGACGTATCCGCCGATGCTCCCGACGACGACGCCGGTGTGTTCGCTCGCCACGACGGATTCAAGTGGCAGAGAGTCGAGAAGCTCTGCAACGAAGTCAGGGAGTTCGGCGCGGATATCATCGACGTTGATGAGCTGGCCTCCGTCTACGACTTTCGCATCGACAAGTTTCAGCGGCAGGCGATACTGGCGTTTCTGAGAGGCTCGTCGGTGGTGGTTTCCGCTCCGACGAGCAGCGGCAAGACGCTGATTGCGGAAGCCGCGGCGGTGGCCACGGTGGCTCGGGGACGGCGAATATTCTACACGACGCCGCTCAAGGCGTTGTCCAATCAAAAGTTTCGCGAATTTCGTGAGACTTTTGGTGACAGTAACGTTGGCCTTCTTACGGGTGATTCTGCCGTGAACAAGGATGCTCAGGTTTTGATTATGACCACGGAGATATTGCGCAACATGTTGTATCAGAGTGTTGGTAATGTTTCATCTGGACATGGACTTGTAAATGTTGATGTTATTGTTTTGGATGAAGTTCATTACCTTAGTGACATATCTCGTGGTACAGTCTGGGAGGAGATTGTTATTTATTGCCCAAAAGTAGTTCAACTAATTTGCCTGTCAGCAACTGTTGCAAATCCAGATGAGTTGGCTGGCTGGATTGGTCAGATTCATGGTGAAACAGAATTGGTAACATCGTCAAAACGCCCAGTTCCATTGACTTGGCATTTCTCTATGAAGAATTCCTTATTACCACTTCTTGACGAGAAAGGAACACATATGAACAGCAGGAAGCTGTCATTCAATTATTTACAACTTCAAGCTGCAGGGGCTAAAGCTTACAAGGATGATTGGTCTAGAAAAAGGAATTCTCGGAAACGGGGAACACGCTTTAGCTACGATAGTGATGATAGCATGTTTGAACAACGTTCTCTTTCAAAGAATGATATAAATGCCATTCGTCGATCACAAGTTCCTCAAGTAATTGATACATTATGGCAACTTCAGTCCAGAGATATGCTGCCAGCTATTTGGTTTATTTTTAGCAGGAAGGGTTGTGATGCAGCTGTGCAATATCTAGAAAATTGCAAACTTTTAGATGAGTGTGAATCAAGTGAGGTTGAACTAGCCTTGAAGAAGTTCCGCAAGCTGTATCCTGATGCTGTCAGAGAATCATCTATAAGAGGACTTTTGCAAGGGGTTGCCGCACATCATGCTGGATGTCTACCTTTGTGGAAGGCATTCATAGAAGAGCTGTTTCAAAGAGGACTTGTTAAGGTTGTTTTTGCTACAGAAACCCTGGCTGCTGGAATCAATATGCCTGCCAGAACAGCTGTTATTTCATCCCTCAGCAAAAGGGGTGATAGTGGGCGTATACCATTAAGCTCAAACGAACTGCTTCAGATGGCTGGGCGTGCAGGACGCAGAGGCATTGATGAAAGTGGTCATGTAGTGCTCATCCAAACTACTAATGAAGGTGCTGAGGAGGGCTGCAAAGTTCTTTTTGCTGGACTAGAGCCTCTAGTGTCACAGTTTACTGCTTCATATGGAATGGTTTTGAATCTTCTTGCTGGTGTGAAAGCCATTCAGTGGTCAAATGAATCGGGTAACATGAAACCTTCCACGGGGAGAACATTGGAAGAAGCTAGGAAATTAGTTGAACAGAGTTTTGGGAATTATGTTAGTAGCAATGTAATGCTGGCTGCTAAAGAGGAACTTGATAAAATTAAGAAAGAAATTGAGTTGCTGATGTTAGAAACTACTGATGAAGCTGTAGATAGAAAAACCAGGAAGGCCTTAGCACCACGGCAATACAAGGAAATTGCAGAATTACTGGAAGATTTAAGATCAGAAAAGCGTGTTCGGTCTAAATTGCGCAAACAGATGGAAGCAAAGAGAATGTCTGCCCTGAAACCTTTGTTGGAGGAGCCCGAAAGTGGACATTTACCATTTTTGTGCTTGCAGTATAGAGATTCTGAAGGAGTTGAACATTCAATTCCTGCTGTGTTTTTGGGCAAGGTTGACTCCCTCGATGCTTCAAAACTCAAAACTATGATTACTTCTGTTGATTCTTTTGCATTGAATTTAGCAGGAGTAGAGCCAAGTGTTGCAGATTCTGCACTGAATAAAGATCTTAAACCTTCATATCATGTGGCTCTTGGTTCAGATAACACTTGGTATCTATTTACAGAAAAGTGGGTTAAGACGGTATATGGGACAGGCTTTCCTAATGTTCCATTGGCTCAAGGGGATGCTCGACCTCGAGAAATTATGAGCACTCTCCTTGATAACGGTGATATGAATTGGGATAAGCTTTCTCACTCTGAGCATGGTGGTTTATGGTTCATGGAAGGATCTCTTGATACATGGTCTTGGAGCTTAAATGTTCCTGTTTTGAGTAGCTTGTCAGAAAATGATGAGCTACTACTAAAGTCTCAAGATTACAAAGATGCCATTGAATGTTACAAGGATCAGAGAAATAAAGTTGCACGGTTGAAGAAAAAGATATCTCGTAGTGAAGGCTATAAAGAATATTTTAAAATTCTAGACGCAGTCAAGTTTGTTGAGGAGAAAATCAAGCGCCTGAAGAATAGATCTAAACGTTTGATTAATAGGATCGAACAGATTGAACCCTCAGGTTGGAAGGAGTTTATGCAGGTTAGCAATGTCATTCATGAAATCAGAGCTTTAGATATTAATACACATGTCATATTTCCACTTGGTGAAACCGCTGGTGCAATTCGAGGAGAAAATGAGCTATGGCTTGCGATGGTTCTTCGCAATAAAATTTTACTAGATCTAAAACCTCCACAACTCGCTGCAGTGTGCGCAAGTTTAGTGTCTGTGGGTATCAAAGTCCGACCCTGGAAAAATAACAGTTACATTTACGAGCCTTCCGCAACTGTAACCAAATTTATAACCTTATTAGATGAACAAAGAAATGCCTTATTGGCATTGCAGGATAAACATGGGGTGACCATCTCTTGCTGTTTGGATAGCCAGTTTTGTGGCATGGTTGAGGCCTGGGCTTCTGGGTTGACTTGGAGAGAAATAATGATGGATTGTGCAATGGATGATGGCGATTTAGCTCGTCTCCTTCGCCGGACCATTGATATCTTAGTTCAGATTCCAAAGTTGCCAGATATTGATCCATTGTTGCAGCGCAATGCAAAGGCTGCTTCTGCTGTCATGGATCGGCCTCCGATAAGTGAACTTGTGGGGTAA 3498 0.4383 MATNTHFILSLPPRHAFSFSSSSFPFLPTNTTLSFSLLRLRSLPLSLNFRASFSFKSPTSTIRAFSDAEEDDEEDDDDEEEDEDEDDDVAADEYDDVSADAPDDDAGVFARHDGFKWQRVEKLCNEVREFGADIIDVDELASVYDFRIDKFQRQAILAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARGRRIFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGNVSSGHGLVNVDVIVLDEVHYLSDISRGTVWEEIVIYCPKVVQLICLSATVANPDELAGWIGQIHGETELVTSSKRPVPLTWHFSMKNSLLPLLDEKGTHMNSRKLSFNYLQLQAAGAKAYKDDWSRKRNSRKRGTRFSYDSDDSMFEQRSLSKNDINAIRRSQVPQVIDTLWQLQSRDMLPAIWFIFSRKGCDAAVQYLENCKLLDECESSEVELALKKFRKLYPDAVRESSIRGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRGDSGRIPLSSNELLQMAGRAGRRGIDESGHVVLIQTTNEGAEEGCKVLFAGLEPLVSQFTASYGMVLNLLAGVKAIQWSNESGNMKPSTGRTLEEARKLVEQSFGNYVSSNVMLAAKEELDKIKKEIELLMLETTDEAVDRKTRKALAPRQYKEIAELLEDLRSEKRVRSKLRKQMEAKRMSALKPLLEEPESGHLPFLCLQYRDSEGVEHSIPAVFLGKVDSLDASKLKTMITSVDSFALNLAGVEPSVADSALNKDLKPSYHVALGSDNTWYLFTEKWVKTVYGTGFPNVPLAQGDARPREIMSTLLDNGDMNWDKLSHSEHGGLWFMEGSLDTWSWSLNVPVLSSLSENDELLLKSQDYKDAIECYKDQRNKVARLKKKISRSEGYKEYFKILDAVKFVEEKIKRLKNRSKRLINRIEQIEPSGWKEFMQVSNVIHEIRALDINTHVIFPLGETAGAIRGENELWLAMVLRNKILLDLKPPQLAAVCASLVSVGIKVRPWKNNSYIYEPSATVTKFITLLDEQRNALLALQDKHGVTISCCLDSQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDILVQIPKLPDIDPLLQRNAKAASAVMDRPPISELVG* 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01181 1165 Pfam DSHCT (NUC185) domain 994 1160 IPR012961 -
Phac2g01181 1165 MobiDBLite consensus disorder prediction 62 91 - -
Phac2g01181 1165 FunFam DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 947 1157 - -
Phac2g01181 1165 Gene3D - 328 597 IPR027417 -
Phac2g01181 1165 SMART helicmild6 466 568 IPR001650 -
Phac2g01181 1165 SMART DSHCT_2 990 1164 IPR012961 -
Phac2g01181 1165 SMART ultradead3 144 334 IPR014001 -
Phac2g01181 1165 Coils Coil 657 677 - -
Phac2g01181 1165 MobiDBLite consensus disorder prediction 67 91 - -
Phac2g01181 1165 FunFam ATP-dependent RNA helicase 111 327 - -
Phac2g01181 1165 Gene3D - 942 1157 - -
Phac2g01181 1165 Pfam DEAD/DEAH box helicase 151 303 IPR011545 GO:0003676|GO:0005524
Phac2g01181 1165 Coils Coil 943 963 - -
Phac2g01181 1165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 581 IPR027417 -
Phac2g01181 1165 Gene3D - 109 327 IPR027417 -
Phac2g01181 1165 Coils Coil 896 926 - -
Phac2g01181 1165 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 156 320 IPR014001 -
Phac2g01181 1165 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 415 614 IPR001650 -
Phac2g01181 1165 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 79 1160 - -
Phac2g01181 1165 Coils Coil 699 719 - -
Phac2g01181 1165 CDD SF2_C_Ski2 412 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01181 Phac-Chr2 8478576 8486991 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01181 K26077 - gmx:100780908 1961.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01181 2 8478576 8486991 Phac2g01181 2 8478576 8486991 ECH