Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01047 ATGTTTGGAGGCAACAATGGAAATCGCTTGCTTCCTGTTTTCTTGGATGAGACTCAATTTCGGCATCAAACAAATGCGTCAAATCAGTTGCAGTTGTTTGGAAATTTACAAGCTGGATGTAGTGTTGACCCAGTTAATTACTTCGGAAATGAGCATGTCAGCTCCATGATTCAGCCTAATAAACGCAGCAAGGAAATGGAAGATATATCAAAACAAAGGCTTCAGATTTCCTTAAATTACAATGTCAATCAAAAGGATGCTGATCGATTAGCAAGCATTCAAAATCCTAACCCTGTGTCCACAGGATTGAGGCTTTCATATGACGATGATGAGCATAACTCATCTGTTACTTCTGCGAGTGGCAGCATGACTGCCACACCGTCTATCATATTGTCTCTTGGTGATAATATCAGAACTGAGCTTGATAGACAGCAAGAAGAGTTGGATCAGTATATTAAACTTCAGAAGGAACAGTTGTCAAAAGGGGTGAGAGACATGAAGCAAAAACACATGACTGCTCTCCTCTCCTCCATTGAGAAAGGTATTAGCGCAAAGCTAAAGGAAAAAGATGTGGAGATAGAAAACATGAATCGGAAAAACAGGGAGCTGGCAGAAAGAATAAAGCAGGTGGCTATTGAAGCACAAAGCTGGCATTACAGAGCAAAGTATAATGAGTCGGTTGTGAATGCATTAAGGAACAACCTGCAGCAGGCAATTTCTCAAGGTGCTGAACAAGGGAAGGAAGGGTTTGGAGATAGTGAAGTTGATGACGATGCCTCATATATAGATCCTAACAACTTCCTAAATATACCGGGTGCGCCTATAAATTCTACTCACAAGACCTACCAAAATGCAGAGAATCTGACTTGCAGAGCTTGCAAGGCAAAGGCAGTTTCCATGTTGTTGATGCCTTGTAGGCACCTGTGCTTGTGTAAGGATTGTGAGGGATTTATCAATGTTTGTCCCGTTTGCCAATTGATAAAAACTGCAAGTGTTGAGGTGTATCTGTCTTAA 1014 0.4122 MFGGNNGNRLLPVFLDETQFRHQTNASNQLQLFGNLQAGCSVDPVNYFGNEHVSSMIQPNKRSKEMEDISKQRLQISLNYNVNQKDADRLASIQNPNPVSTGLRLSYDDDEHNSSVTSASGSMTATPSIILSLGDNIRTELDRQQEELDQYIKLQKEQLSKGVRDMKQKHMTALLSSIEKGISAKLKEKDVEIENMNRKNRELAERIKQVAIEAQSWHYRAKYNESVVNALRNNLQQAISQGAEQGKEGFGDSEVDDDASYIDPNNFLNIPGAPINSTHKTYQNAENLTCRACKAKAVSMLLMPCRHLCLCKDCEGFINVCPVCQLIKTASVEVYLS* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01047 337 CDD mRING-HC-C3HC5_CGRF1-like 289 324 - -
Phac2g01047 337 Coils Coil 134 161 - -
Phac2g01047 337 PIRSF SBP1_RNase_bind 1 337 IPR017066 -
Phac2g01047 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 273 337 IPR013083 -
Phac2g01047 337 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 53 334 IPR017066 -
Phac2g01047 337 Coils Coil 186 213 - -
Phac2g01047 337 Pfam Zinc finger, C3HC4 type (RING finger) 287 325 - -
Phac2g01047 337 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 271 336 - -
Phac2g01047 337 ProSiteProfiles Zinc finger RING-type profile. 290 325 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01047 Phac-Chr2 6976376 6982452 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01047 290 325 Miscellaneous Gene Families AT2G21380 41.667 3.59e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01047 K19042 - gmx:100791550 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01047 2 6976376 6982452 Phac2g01047 2 6976376 6982452 ECH