Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01022 ATGATCACTTCCCTGTACGAAGCACATTACCACCTCAAGATCCTAGAACACTTTGCTAGTGTTGAATTTCTATCAGACAAACAAAAGGGCCGTGAAGGAATGAAGAGGAACAGAAGTTTTTCCTTACTCTTTTTCCTCTCCTTGTTGGTGATTATCTTTGTCACCTTCTCTACCGTTTCTGTGGAAGCAAGGAAGAAAAATCTCCACAAACGTAACAATCATAAAGATAGTCACAGTGGCAATGGCCACGGTCGAGGGTCACATTCTCCACGTCCAACACCAACCCCTCCTCCTTATTATGGTCCTCAAGAGAGCATGTTTGACGTTTTGTCTTTTGGTGCCAAGGGTAATGGAGTTTCTGATGATTCAGAGGCACTTGTAGCTGCATGGAAAGGTGCATGTAAAGTTGCTGGTGCTACAGTAAAAATTCCAGCACAACTCAAGTTCCTCATCAAACCTGTTACTTTACAAGGCCCTTGTATGCCTGACCTTACTCTTCAGATAGATGGAACTCTATTGGCACCTCCTCAAGCATCTTCTTGGCCAACATCCAGTTTGTTTCAGTGGATAAATTTCAAGTGGGTGCAGAACTTCACCATCAAAGGTTCTGGCACTGTTGATGGCCAAGGTTATTACTGGTGGAAATCCTCAGAATTTTATGACATACAGAAAAAGAGCTATTCCAAAAATATTCCAAGCATGAAACCAACAGCAATAAGATTTTACTCCAGCAACTCTGTCACAGTTCGTGATATCAGAATCATAAACAGTCCTCTGTGCCATCTAAAATTTGACAACTCAAAGGGGGTTGAAGTTGACAACATTACAATATCCTCCCCAGAGAGTAGCCCAAACACTGATGGCATTCACTTACAGAACACACAGGACGTGGAAATTAAACGTTCTATCATTGCAACAGGAGATGACTGTGTATCCATCCAAACCGGTTGCTCTAATATTCATGTCCACCACATTAATTGTGGCCCTGGACATGGTATAAGTTTGGGAGGATTAGGGAAGGACAAGAGTGCAGCATGTGTGTCTGACATCATTGTTGAGGATATCTCTATGAAAAACACTCTATATGGAGCAAGGATCAAAACATGGCAGGGAGGCTTTGGTATGGTTAAAAACGTGTCATTTTCCAGAATTCAAGTCTACGATGTTATGTTTCCAATAATGATAGACCAATACTATTGTGACAAGCAAAAGTGCAAGAACCACACAAGCACTGTGGTGATTTCTGGGGTTAAGTTTGATGAGATAAGTGGAACTTTTGGGATACAACCAGTCCATCTAGCTTGCAGCACTTCCATACCATGCACAGATGTTGATTTAACTGACATTCAACTGAGTCCCTCCCCTAAGTATAAAGGTTTGCAACAAGCTGTGTGCTGGAACTCTTATGGAAAATCACAAGGCCCCTTGCTACCTTCAAGCATTGATGATTGCTTGAAAAGTGGTGGTGGATTAATCAAGAGGATAGCAAGGTCACATGATAGAGTGTGTTACTAA 1515 0.4185 MITSLYEAHYHLKILEHFASVEFLSDKQKGREGMKRNRSFSLLFFLSLLVIIFVTFSTVSVEARKKNLHKRNNHKDSHSGNGHGRGSHSPRPTPTPPPYYGPQESMFDVLSFGAKGNGVSDDSEALVAAWKGACKVAGATVKIPAQLKFLIKPVTLQGPCMPDLTLQIDGTLLAPPQASSWPTSSLFQWINFKWVQNFTIKGSGTVDGQGYYWWKSSEFYDIQKKSYSKNIPSMKPTAIRFYSSNSVTVRDIRIINSPLCHLKFDNSKGVEVDNITISSPESSPNTDGIHLQNTQDVEIKRSIIATGDDCVSIQTGCSNIHVHHINCGPGHGISLGGLGKDKSAACVSDIIVEDISMKNTLYGARIKTWQGGFGMVKNVSFSRIQVYDVMFPIMIDQYYCDKQKCKNHTSTVVISGVKFDEISGTFGIQPVHLACSTSIPCTDVDLTDIQLSPSPKYKGLQQAVCWNSYGKSQGPLLPSSIDDCLKSGGGLIKRIARSHDRVCY* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01022 504 MobiDBLite consensus disorder prediction 66 100 - -
Phac2g01022 504 PANTHER - 105 471 - -
Phac2g01022 504 FunFam polygalacturonase At1g48100 95 487 - -
Phac2g01022 504 Gene3D - 100 484 IPR012334 -
Phac2g01022 504 Pfam Glycosyl hydrolases family 28 139 459 IPR000743 GO:0004650|GO:0005975
Phac2g01022 504 SUPERFAMILY Pectin lyase-like 98 480 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01022 Phac-Chr2 6658103 6661084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01022 34 503 Glycoside Hydrolase AT3G26610 60.879 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01022 K01213 - gmx:100803027 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01022 2 6658103 6661084 Phac2g01022 2 6658103 6661084 ECH