Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00847 ATGGGTTGTTTCCACTCCAAAGTACGTGAGTTTCCCATGGAAGATCCGTTTGCTCTTGCATCTGAAACAGCTTTTAGCGTCAGTGATGTTGAAGCACTATATGAGCTTTTTAAGAATATTAGCAGGTCCGTTATCGATGATGGTCTGATAAGTAAGGAAGAATTTCAACTGGCAATTTTTAATAATAAGAAGAAGGAAAATCTCTTTACGAGTCGGATCTTTGATCTATTTGATGTGAAGAAGAAAAGAGTGATTGACTTTGGTGATTTCGTTAGAGCACTCAATGTTTTTCACCCATCTGCACCAATAGAAGTCAAAATAGATTTTTCGTTTAAGCTGTACGATTTAGATAATACAGGATTCATAGAGCGTCACGAGGTGAAGCAAATGATAAATGCCCTTCTATGTGAAGCAGAAATTAAGTTATCAGATGACATGATAGAAACAATTATTAATAAGACTTTCATGGATGCTGACCCTAATCAAGATGGAAAAATCGACAAATATGAGTGGAAAAACTTTGTTTTCGAAAACCCTTCATTGTTAAAAGTCATGACGTTACCCTACTTGAGGGACGTAACAACTGCGTTTCCAAGTTTTGTATTTCATTCGAAGGTGGAAGATGAAATTACAGAATAA 639 0.3584 MGCFHSKVREFPMEDPFALASETAFSVSDVEALYELFKNISRSVIDDGLISKEEFQLAIFNNKKKENLFTSRIFDLFDVKKKRVIDFGDFVRALNVFHPSAPIEVKIDFSFKLYDLDNTGFIERHEVKQMINALLCEAEIKLSDDMIETIINKTFMDADPNQDGKIDKYEWKNFVFENPSLLKVMTLPYLRDVTTAFPSFVFHSKVEDEITE* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00847 212 ProSiteProfiles EF-hand calcium-binding domain profile. 146 181 IPR002048 GO:0005509
Phac2g00847 212 SMART efh_1 106 134 IPR002048 GO:0005509
Phac2g00847 212 SMART efh_1 150 178 IPR002048 GO:0005509
Phac2g00847 212 SMART efh_1 69 97 IPR002048 GO:0005509
Phac2g00847 212 CDD EFh 106 175 IPR002048 GO:0005509
Phac2g00847 212 ProSitePatterns EF-hand calcium-binding domain. 115 127 IPR018247 -
Phac2g00847 212 PANTHER CALCINEURIN B 1 208 IPR045198 GO:0005509|GO:0019722|GO:0019900
Phac2g00847 212 FunFam calcineurin B-like protein 3 15 208 - -
Phac2g00847 212 ProSitePatterns EF-hand calcium-binding domain. 159 171 IPR018247 -
Phac2g00847 212 SUPERFAMILY EF-hand 19 200 IPR011992 -
Phac2g00847 212 ProSiteProfiles EF-hand calcium-binding domain profile. 65 100 IPR002048 GO:0005509
Phac2g00847 212 Pfam EF-hand domain pair 106 173 IPR002048 GO:0005509
Phac2g00847 212 PRINTS Recoverin family signature 166 186 - -
Phac2g00847 212 PRINTS Recoverin family signature 120 138 - -
Phac2g00847 212 PRINTS Recoverin family signature 73 94 - -
Phac2g00847 212 ProSiteProfiles EF-hand calcium-binding domain profile. 102 137 IPR002048 GO:0005509
Phac2g00847 212 Gene3D - 15 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00847 Phac-Chr2 5422214 5426532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00847 1 211 EF-hand Containing Proteins AT4G17615 72.300 2.53e-110 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00847 K06268 - gmx:100779020 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g00847 2 5422214 5426532 Phac2g00847 2 5422214 5426532 ECH