Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00845 ATGTACAGAGAGCGAGGAGTGGGATCTAAATCGGAGGTAACTTCCGCTGATCGGAAGCGAATCAACGACGTCCTCGATAAACAGCTCGAACGATCCTCGCCGTCCACATCCAGAGCCGCAGCCATCAACGGCAAGGACCGCTCATCCTCCTCTTCCCTCTTAGCCGCCGCCAAGGACTCCCGCTCCGCCTCCGTCACCGCCCCTATCTCCAAGAATTCCAACGCTTCCGACGAAGAGTCTGAAACAGACAGCGAGGAGTCTGATGTTAGCGGTTCCGATGGAGATGACACGTCTTGGATCTCGTGGTTCTGCAATTTGAGAGGAAATGAGTTCTTCTGCGAGGTTGATGACGATTACATCCAGGACGACTTCAACCTATGCGGATTAAGCAGTCAAGTGCCTTACTATGATTATGCTCTGGATTTGATTTTGGATGTTGAATCCTCCCATGGTGACATGTTTACCGAGGAACAAAATGAGTTAATTGAATCAGCAGCCGAGATGCTTTATGGTTTGATTCATGCCCGGTACATATTGACAAGCAAAGGAATGGCTGCAATGCTGGACAAGTACAAGAACTATGATTTTGGCAGATGCCCAAGAGTTTACTGCTCTGGACAACCTTGTATTCCAGTTGGTCAGTCAGACATCCCTAGATCCAGTACTGTGAAAATATACTGCCCTAGGTGTGAAGACATTTACTATCCTCGGTCCAAGTATCAAGGCAGTATCCTTATAAATTATATTATTGAACTTGTGTGGGTTTTAGTTGATTATGCATATTTTTTATTCCTTGGTTTTGACTGTAAATACATATATTGA 822 0.4586 MYRERGVGSKSEVTSADRKRINDVLDKQLERSSPSTSRAAAINGKDRSSSSSLLAAAKDSRSASVTAPISKNSNASDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCIPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGSILINYIIELVWVLVDYAYFLFLGFDCKYIY* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00845 273 PANTHER CASEIN KINASE II SUBUNIT BETA 77 244 IPR000704 GO:0005956|GO:0019887
Phac2g00845 273 SUPERFAMILY Casein kinase II beta subunit 96 241 IPR035991 GO:0005956|GO:0019887
Phac2g00845 273 MobiDBLite consensus disorder prediction 1 27 - -
Phac2g00845 273 MobiDBLite consensus disorder prediction 28 75 - -
Phac2g00845 273 ProSitePatterns Casein kinase II regulatory subunit signature. 199 230 IPR000704 GO:0005956|GO:0019887
Phac2g00845 273 Gene3D - 196 263 - -
Phac2g00845 273 SMART CK_II_beta_2 98 251 IPR000704 GO:0005956|GO:0019887
Phac2g00845 273 Pfam Casein kinase II regulatory subunit 98 242 IPR000704 GO:0005956|GO:0019887
Phac2g00845 273 PRINTS Casein kinase II regulatory subunit family signature 170 191 IPR000704 GO:0005956|GO:0019887
Phac2g00845 273 PRINTS Casein kinase II regulatory subunit family signature 115 129 IPR000704 GO:0005956|GO:0019887
Phac2g00845 273 PRINTS Casein kinase II regulatory subunit family signature 195 216 IPR000704 GO:0005956|GO:0019887
Phac2g00845 273 PRINTS Casein kinase II regulatory subunit family signature 217 238 IPR000704 GO:0005956|GO:0019887
Phac2g00845 273 PRINTS Casein kinase II regulatory subunit family signature 98 114 IPR000704 GO:0005956|GO:0019887
Phac2g00845 273 FunFam Casein kinase II subunit beta 91 195 - -
Phac2g00845 273 FunFam Casein kinase II subunit beta 196 247 - -
Phac2g00845 273 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 91 195 IPR016149 GO:0005956|GO:0019887
Phac2g00845 273 MobiDBLite consensus disorder prediction 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00845 Phac-Chr2 5404006 5406056 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00845 K03115 - gmx:100799304 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g00845 2 5404006 5406056 Phac2g00845 2 5404006 5406056 ECH
Phac3g03529 3 35592219 35595204 Phac2g00845 2 5404006 5406056 PCT