Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00474 ATGGCAGTAGTCACCAAAAGCCTCTCAATTTTTCTCTTCGTCGCCGTGAGCTGCGCCGCCGCAGCCCAGGCCGCGCAGTTCAACGTCACAAACAACTGCAACTTCACGGTGTGGGCCGCCGCCGTGCCCGGCGGAGGAGCAAGGCTGAACCCTAACGAGACATGGAGCATCGAGGTGGCGAACGGCACCACGGGAGGGCGCATTTGGGGCCGAACAAACTGCACCTTCGACGACGCGGGACGCGGTGAGTGCTTAACCGGGGACTGCGACGGTGCTCTCGTGTGCAACAATACTCACGGTAAACCCCCGAACACGCTGGTGGAATTCGGGTTGAACCAGTACAGCAACCTCGACTTCTACGACATCTCCCTGGTGGCAGGTTTCAACATTCCAATTCAGTTGAACCCGACATTTAACTGCAGCAGCGTAAAATGCGCCGCCAACATCATCGGAGAGTGCCCCACTGAACTGCAGGTTCCGGGCGGTTGTAACAACCCATGCACGGTTTTCAATACGACAGAGTACTGTTGTACCTCCGGTGCTTCGGGGTGCGGTCCCACCGATTATTCCAAGTTCTTCAAAGAGAGGTGCCCAGATGCGTACAGTTACCCTATGGATGATGCCACCAGCACATTCACTTGCATGGGTGGATCCGATTATAGGGTTGTGTTTTGCCCTTAA 681 0.5609 MAVVTKSLSIFLFVAVSCAAAAQAAQFNVTNNCNFTVWAAAVPGGGARLNPNETWSIEVANGTTGGRIWGRTNCTFDDAGRGECLTGDCDGALVCNNTHGKPPNTLVEFGLNQYSNLDFYDISLVAGFNIPIQLNPTFNCSSVKCAANIIGECPTELQVPGGCNNPCTVFNTTEYCCTSGASGCGPTDYSKFFKERCPDAYSYPMDDATSTFTCMGGSDYRVVFCP* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00474 226 ProSiteProfiles Thaumatin family profile. 24 226 IPR001938 -
Phac2g00474 226 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Phac2g00474 226 Gene3D Thaumatin 24 226 IPR037176 -
Phac2g00474 226 FunFam Thaumatin I 25 226 - -
Phac2g00474 226 Pfam Thaumatin family 31 226 IPR001938 -
Phac2g00474 226 SUPERFAMILY Osmotin, thaumatin-like protein 25 226 IPR037176 -
Phac2g00474 226 PIRSF PR5 1 226 IPR001938 -
Phac2g00474 226 PANTHER OS03G0233200 PROTEIN 11 226 IPR001938 -
Phac2g00474 226 SMART tha2 27 226 IPR001938 -
Phac2g00474 226 PRINTS Pathogenesis-related protein signature 80 109 IPR001938 -
Phac2g00474 226 PRINTS Pathogenesis-related protein signature 216 225 IPR001938 -
Phac2g00474 226 PRINTS Pathogenesis-related protein signature 45 54 IPR001938 -
Phac2g00474 226 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Phac2g00474 226 PRINTS Pathogenesis-related protein signature 67 78 IPR001938 -
Phac2g00474 226 PRINTS Pathogenesis-related protein signature 118 134 IPR001938 -
Phac2g00474 226 ProSitePatterns Thaumatin family signature. 80 95 IPR017949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00474 Phac-Chr2 2406989 2407708 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00474 7 226 Receptor kinase-like Gene Family AT5G38280 35.772 1.47e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00474 - - gmx:100037479 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g00474 2 2406989 2407708 Phac2g00474 2 2406989 2407708 ECH
Phac2g04315 2 41589578 41590367 Phac2g00474 2 2406989 2407708 PCT