Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00473 ATGGCTCACTCACTCTCCCTAACGCCACTTTGCTCCCTCCTCATGCTCGCCTCATTATCCCTCGCCACCGCTGCAAACTTCGAGATCGTCAACAACTGCCCCTACACGGTGTGGGCGGCTGCCAGCCCCGGCGGCGGGCGGCGCCTGGACCGCGGGCAGACGTGGAACCTGTGGGTGAACGCGGGCACTGCCATGGCCCGCATATGGGGCCGCACCGGGTGCAACTTCGACGGCAGTGGGCGCGGGCGGTGCCAGACCGGTGACTGCACCGGCGGCCTGAACTGCCAGGGCTGGGGCGTTCCTCCGAACACCCTGGCGGAGTTCGCCCTGAACCAATACGGGAACATGGACTTCTACGACATCTCCCTGGTGGACGGTTTCAACATCCCGATGGACTTCTACCCCGTGAACGGAGGGTGTCACAAAATCAGTTGCACCGCGGACATTAATGGGCAGTGCCCTGGGCCATTAAGGGCCCAAGGGGGATGCAACAATCCCTGCACTGTGTTTAAGACGAACGAGTATTGCTGCACCAATGGGCAAGGAAGCTGTGGACCCACTACGTACTCTAGGTTCTTCAAAGATAGGTGCCGTGATGCTTATAGTTACCCTCAGGATGACCCTACCAGCACCTTCACTTGCCCTGCTGGTTCTAACTACAGGGTTCTCTTCTGTCCTCTCGGAGATCCTCTTCTTCCTCTTCACATGCTTCCTAATACCACCACCAATCAATATTGA 738 0.5867 MAHSLSLTPLCSLLMLASLSLATAANFEIVNNCPYTVWAAASPGGGRRLDRGQTWNLWVNAGTAMARIWGRTGCNFDGSGRGRCQTGDCTGGLNCQGWGVPPNTLAEFALNQYGNMDFYDISLVDGFNIPMDFYPVNGGCHKISCTADINGQCPGPLRAQGGCNNPCTVFKTNEYCCTNGQGSCGPTTYSRFFKDRCRDAYSYPQDDPTSTFTCPAGSNYRVLFCPLGDPLLPLHMLPNTTTNQY* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00473 245 ProSiteProfiles Thaumatin family profile. 24 226 IPR001938 -
Phac2g00473 245 PIRSF PR5 1 244 IPR001938 -
Phac2g00473 245 SMART tha2 27 226 IPR001938 -
Phac2g00473 245 SUPERFAMILY Osmotin, thaumatin-like protein 26 226 IPR037176 -
Phac2g00473 245 PANTHER OS03G0233200 PROTEIN 14 226 IPR001938 -
Phac2g00473 245 ProSitePatterns Thaumatin family signature. 80 95 IPR017949 -
Phac2g00473 245 Gene3D Thaumatin 24 227 IPR037176 -
Phac2g00473 245 PRINTS Pathogenesis-related protein signature 216 225 IPR001938 -
Phac2g00473 245 PRINTS Pathogenesis-related protein signature 67 78 IPR001938 -
Phac2g00473 245 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Phac2g00473 245 PRINTS Pathogenesis-related protein signature 45 54 IPR001938 -
Phac2g00473 245 PRINTS Pathogenesis-related protein signature 117 133 IPR001938 -
Phac2g00473 245 PRINTS Pathogenesis-related protein signature 80 109 IPR001938 -
Phac2g00473 245 FunFam Thaumatin I 25 226 - -
Phac2g00473 245 Pfam Thaumatin family 31 226 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00473 Phac-Chr2 2402699 2403767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00473 1 226 Receptor kinase-like Gene Family AT5G38280 35.060 5.54e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00473 - - gmx:100240704 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g00473 2 2402699 2403767 Phac2g00473 2 2402699 2403767 ECH
Phac2g04316 2 41600258 41608475 Phac2g00473 2 2402699 2403767 PCT