Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00438 ATGGGATCTCTTAATCTGAAATGGACGCCAGGGTGCTTGGTTTTTGGGAAGGTGGAGTCAAGTTATGGTAAGTTTAACAGCAAAGAGAGAAGAGGAGCAATATTCAAAGGAGGGCGAAGATCTGTAATTGTTGCTACGGGGCCAGCCATAGACCAGGCTCCTGCTATTGCCCAAGAGCCCTTGACAAAAGATCATCTTATTCAGTACATGGCATCTGGTTGCAAGCCCAAACAAAACTGGAGAATAGGTACAGAGCACGAGAAGTTTGGGTTTGACCGTAAAACTTTGCGTTCAATTAATTACGAACAATTATCTGCTTTACTCAATGGCATTGCTGAGAGATTTGATTGGGAAAAAATAATGGAAGGTGACAACATTATAGGACTGAAAAATGACACGCAAAACATATCATTAGAGCGTGGTGGTCAGTTTGAGCTTAGTGGTGCGCCTTTGAAAACATTGCATCAAACTTGTGATGAGGTTAATTCACATTTCTATCAGGCTAAAACTGTTGCAGATGAAATGGGAATTGGATTTTTGGGATTAGGTTATCAGCCTAAATGGAGATTGGAAGACATAATTAGAGTGCCTAAGGAACGGTATAACCTTTTACAGAAACAGTTAGGCAAATTTGGCTCGTCTGGACTTGAAATATTGATCATGACATGCTCAGTTCAGGTGAACCTGGACTTCAGTTCGGAAGCAGACATGATCAGGAAAATGCGTGCCAGTATTGCTTTGCAGCCTTTAGCAGCAGCCTTATTTGCCAATTCACCTTTCAAGGATGGGGTTCCAAGTTCTTATCTCTCCACCAGAAGCAATGTCGGTGAGTTTGACAAACATCGCACTGGCATACTCCCCTTTGTTTTTTATGACAATTTTGGGTTTGAACAGTATGTTGATTATGCTCTTGATGTGCCAATGGTGTTTGTTTATCGCGGAAACAAGTACATTGACTGTCGTGATATGTCATTCCGGGACTTCATGGCAGGTAAACTCCCTGCCATTCCAGGTCAAGTGCCAACACTAGCTGACTGGGAAAATCATCTAACAACCATATTTCCTGAGGTCAGGCTAAAGAGATACATGGAAATGAGAGGTGCTGATAATGGCCCTCTCCACATGATATGCGCAGTCCCGGCATTTTGGGTAGGTTTGCTGTATGATGAGGTTTCACTGCAAAATGTTTTAGACATGATTGCTGATTGGACCACTGAAGACCTACAGAATTTAAGGAATATGGTTCCCATGACTGGATTAAGGACTTCAATTCAAGGTAGATTGCTGAGGCATATTGCAGAAGATGTGTTGAAGTGGGCAAAGGAGGGGCTGGACAGAAGAGGCTTAAATGAATCCGTTTTCTTGGATCCATTGAAGGAAGTGGTCTTCACAGGTTTGACCCAAGCAGACAAGCTGTTGGAGTTGTATCATAGCAACTGGGGAAAGAACATAGATCATGTGTTCAGAGAGTGCAGCTACTAA 1482 0.4265 MGSLNLKWTPGCLVFGKVESSYGKFNSKERRGAIFKGGRRSVIVATGPAIDQAPAIAQEPLTKDHLIQYMASGCKPKQNWRIGTEHEKFGFDRKTLRSINYEQLSALLNGIAERFDWEKIMEGDNIIGLKNDTQNISLERGGQFELSGAPLKTLHQTCDEVNSHFYQAKTVADEMGIGFLGLGYQPKWRLEDIIRVPKERYNLLQKQLGKFGSSGLEILIMTCSVQVNLDFSSEADMIRKMRASIALQPLAAALFANSPFKDGVPSSYLSTRSNVGEFDKHRTGILPFVFYDNFGFEQYVDYALDVPMVFVYRGNKYIDCRDMSFRDFMAGKLPAIPGQVPTLADWENHLTTIFPEVRLKRYMEMRGADNGPLHMICAVPAFWVGLLYDEVSLQNVLDMIADWTTEDLQNLRNMVPMTGLRTSIQGRLLRHIAEDVLKWAKEGLDRRGLNESVFLDPLKEVVFTGLTQADKLLELYHSNWGKNIDHVFRECSY* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00438 493 PIRSF GCL 49 493 IPR035434 GO:0004357|GO:0006750
Phac2g00438 493 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 37 493 IPR035434 GO:0004357|GO:0006750
Phac2g00438 493 Gene3D - 46 493 - -
Phac2g00438 493 NCBIfam glutamate--cysteine ligase 60 493 IPR011556 GO:0004357|GO:0006750
Phac2g00438 493 Pfam Glutamate-cysteine ligase family 2(GCS2) 112 403 IPR006336 GO:0004357|GO:0042398
Phac2g00438 493 SUPERFAMILY Glutamine synthetase/guanido kinase 72 484 IPR014746 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00438 Phac-Chr2 2172173 2176829 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00438 K01919 - gmx:100775188 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g00438 2 2172173 2176829 Phac2g00438 2 2172173 2176829 ECH