LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g00428	ATGGTGAATCGTCCTCGCCTGACTCGGGTGGCGACCAGCGATGACGAAGACGAAGCGCTGCGCCCACAACGCACGCGGAAGAGGATGAGGCTTCTGGAGGAAGACAACGATGATGACAATGAAGAAGAAGGAAAAGAAGAGGTACCGGAACCGCCTCAACCTGCGGAGGACGCTAAGCCTATTGGCAACCCTGTTAGGGTTTCGGGAAAAGGAAGAGGTAGGAAAAGGCACTATGACTCCTTCGAGTTCGATGGCATCCAATATACTCTCGAGGACCCTGTTCTTCTCGTACCCGAGGAGAAAGGCCAAAAGCCATATGTAGCAATTATTAAGGACATTACACAGTCTATCAATGGCAACGTGAAAGTAACGGGACAATGGTTTTATCGCCCAGAAGAAGCTGAGAAAAAAGGAGGTGGAAACTGGCAATCGTGTGATACGAGGGAGCTGTTTTATAGTTTTCATCGTGATGATGTTCCTGCGGAGGCTGTAATGCATAAGTGTGTGGTGCATTTTGTTCCTAGACACAAACAGCTTCCAAAACGTAAGGATCACCCTGGGTTTATTGTACAGAAGGTGTATGACACTGTGGAAAGAAAACTCTGGAGGCTGAGTGATAAGGACTATGAGGATATTAAGCAGCAAGAAATTGATGTTCTTGTTCAAAAGACTCTGGAACGTATTGGTGAACTTCTTGACATTGAGCCTAAGGAAGCCCCTGATGATGACGAGGACCAAATGAAACATAGAAGAAGCTTAAGCTTGAGGAGAAAGAGTGTTTCACCTCCCAATGTTTCAAAGGAAGAGGAGGAAACACTCAGGAGCGAACAACATCCAAAGTCAGAAACACCAGTGACTTATGTAACTAATGCCTCAGAGTATTATGGCATATTGGTAGAATTCAACGCGCTAACTGGAGATAGCCATCGTGACAAATGGTTGGAGAGGTTGCTTCAACGCATTCAGTACATGTGTGATTCCAATGATAGCAAAGAAAGGGACAAAGGATTGGGAAATGTCAATTCTGATGAAATCAACGGTGGAAGCAAGCATATAAGTTCAGAATCAGTAAATGACTGTCAAGATAAGGTTCAGAAGAGTTCCAAGTCTTTTATCTGGCCAGATGCTGCTGTATCAGCCATAGTTTCTCTCGAAAAAGCTTCACATGAGGCTCTCTCATCAGATTCTATGAAGTACAACCAAAAGTTGCGGCAATTGGTTTTTAATCTCCAGAAAAATGCAGTGTTAGCATGCCGTCTGTTAAGCGGAGAATTGGAACCTTCAAAACTATTAAATATGACACCCAATGAATTAAAGATTGAGCTGCTCGTTGATGCATAA	1341	0.4407	MVNRPRLTRVATSDDEDEALRPQRTRKRMRLLEEDNDDDNEEEGKEEVPEPPQPAEDAKPIGNPVRVSGKGRGRKRHYDSFEFDGIQYTLEDPVLLVPEEKGQKPYVAIIKDITQSINGNVKVTGQWFYRPEEAEKKGGGNWQSCDTRELFYSFHRDDVPAEAVMHKCVVHFVPRHKQLPKRKDHPGFIVQKVYDTVERKLWRLSDKDYEDIKQQEIDVLVQKTLERIGELLDIEPKEAPDDDEDQMKHRRSLSLRRKSVSPPNVSKEEEETLRSEQHPKSETPVTYVTNASEYYGILVEFNALTGDSHRDKWLERLLQRIQYMCDSNDSKERDKGLGNVNSDEINGGSKHISSESVNDCQDKVQKSSKSFIWPDAAVSAIVSLEKASHEALSSDSMKYNQKLRQLVFNLQKNAVLACRLLSGELEPSKLLNMTPNELKIELLVDA*	447

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g00428	446	MobiDBLite	consensus disorder prediction	262	278	-	-
	Phac2g00428	446	MobiDBLite	consensus disorder prediction	1	74	-	-
	Phac2g00428	446	Gene3D	-	297	440	IPR036575	GO:0006351
	Phac2g00428	446	ProSiteProfiles	BAH domain profile.	86	205	IPR001025	GO:0003682
	Phac2g00428	446	SUPERFAMILY	Elongation factor TFIIS domain 2	304	438	IPR036575	GO:0006351
	Phac2g00428	446	PANTHER	BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN	1	441	-	-
	Phac2g00428	446	SMART	mid_6	343	446	IPR003618	GO:0006351
	Phac2g00428	446	CDD	BAH_plant_3	68	214	-	-
	Phac2g00428	446	Pfam	BAH domain	87	201	IPR001025	GO:0003682
	Phac2g00428	446	MobiDBLite	consensus disorder prediction	9	34	-	-
	Phac2g00428	446	MobiDBLite	consensus disorder prediction	342	356	-	-
	Phac2g00428	446	SMART	BAH_4	86	205	IPR001025	GO:0003682
	Phac2g00428	446	MobiDBLite	consensus disorder prediction	235	283	-	-
	Phac2g00428	446	MobiDBLite	consensus disorder prediction	235	251	-	-
	Phac2g00428	446	ProSiteProfiles	TFIIS central domain profile.	309	446	IPR003618	GO:0006351
	Phac2g00428	446	Pfam	Transcription factor S-II (TFIIS), central domain	305	441	IPR003618	GO:0006351
	Phac2g00428	446	MobiDBLite	consensus disorder prediction	330	356	-	-
	Phac2g00428	446	Gene3D	-	70	295	IPR043151	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g00428	Phac-Chr2	2148268	2154662	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g00428	-		-	gmx:100776280	765.377

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phac2g00428	2	2148268	2154662	Phac2g00428	2	2148268	2154662	ECH
	Phac2g04359	2	41832772	41840743	Phac2g00428	2	2148268	2154662	PCT