Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00390 ATGAACGGGGTGGCGGGGTTGCCACTGCCGCCAAATTCGTCGCCGTCTGTGATCAACATGTATAGAATCAACAAAGTTACGGAGCGTTTGGCTTGGCTTGCTCAACCCGGCAACCGAGGCGATCCTAAAGAATTTTATAACCACTGCCTCTCCCTCTCTCGAGGCATTGATTATGCACTTGCCAATGGGGAAATTCCAGGCAATGCTCCTGAGCTGCCTTTGCTGGTGAAGCAGATTTGTCAACTAAAGAATGATGAACTTTCGCAAGCTGCTCTGATGGTGTTGTTGATATCTGTAAAGGGTGCCTGTGAAATTGGATGGTTCCAATCAAAAGAATCAGAAGAACTTCTTACTATTGTGGATGAGATCGGAAAAGTCTACAGCAGTGTGGGGACTATAAATGCTAGACCCAGACAGTGCAGTTCTGAAATATCAACAATAATGGAGAAGTTCTACCCTAATGTTAAATTGGGTTCAATACTTGCATCAATTGAGGTCCAGGAGCCTGGATATGGAGCTTCTGTGGTCGATTTTCATATTACAAAGAGTGAATTTGTTAAAGACAAAATTTTTTTATTGGTGGCACAGATAGATAACATTGAGATATCAGCATGCCTCATAAGTCCTCAGCAAGTGAATTTTCTCCTCAATGGAAAAGGAGTAATCAATAGGACTAATGTTCAAATGGATCCTGGACCACAAATGCCAACTGATGTGACTGGTATGCTTAAATTTGGGACAAATCTTCTTCAAGCTGTGGGCCACTTCACTGGTCGTTACACTGTACTCATTGCTTATATGAGTTTTACACCCTTGCATGAAGATCCAGTACTTCAAGATTATCTCCAGCCTGTTGTTACCTCTGTTGATTCTGATTCGGATATTATTGAGGGGGCTTCACAGATTTCGCTAAATTGTCCAATAAGCTTTACACGAATTAAGACTCCTGTTAAAGGGCGATCATGCAAACATTTCCAGTGTTTTGACTTTAACAACTTCATTAGTATCAATTCAAAAAGGCCATCCTGGCGCTGCCCTCATTGCAATCAGTATGTTTGTTATGCTGATATTCGACTTGACCGAAACATGGTTGAGATCCTGAAAAATGTTGGTGAGAGCATTACGGAAGTGATTGTCCTTGCTGATGGATCTTGGAAGGCAGTCATGGAAAAGGATCATGATGTGGATAAGATGCAAAAGAAGGCCCCCAACTATGAAAAGGAACAAACTGAACCACAGGAATATACTTGCTCTCCTGCGACTGTTGACCTCACTGAAGATGATGATCATTTGGAGACAATGGACTGTTCTGAAATTGTAGATAGAAAACCTTTCCAGGCATCTGTTCAAAGTCAGTTTGCCGCTCCAAATTCAACTTCCTTGGGTATGAACTCTCCTGGTGTTAATCGAAATGTTGCTGCTCAAATAGATGACTTTTTCTCTGGGGTTTATGTTGCCCGTAATAGGTCTGATGTCCCAATGGTTGGTACCTCTGAGCTACCTGTTCTGCCTGATACTGTTTCTCCAGCATTTAATCAGGAATCTGCAGGTCGTGACAATAACTCTGCTGTTAACTCTGCCATGCGTAATCAATTTTTGGCACCAAACAATTTGCAGATGCAAATGAATCATATGAATTCAGTTAACGAGTATGGTAGGTCATCCTCAGTGCCAAGACATATTACTAGAACTCCAGTAGCTGTTCAGGCCCTCCCAGTCCAATCCCAGGCATTGGGTTTAAATAATTCTCTGCTATCTACCAATTCCTCTTCTTCTCATATTCCTTTGCCCAGCTCTACTACTACTGTAGATACTTTGAAAGCCATACTAAGTGATACTGAAAGACAGCAACGTTTTTCTCGATCCCCAATGAATCTGCCTCAGGTCTCAGGTGTGAATTCACCTGCATTTCGACATCACCCTGCAACACAGAATCGGGTACAAGTAAAGAACACATCAACACCAACTCAATTGCAGAACCAATCCAGATCTACATCAACACCGACTCAATTGCAGAACCAATCCAGATCTAGTTCGTTATCTGATTTTGGAAATCCACACCTGCAGCAAGCTCTGAATCTTCAGCCACCTCGATTGCCTCTAAATTTCCGACCACCCCCACCAATGCGACCATCTACTACCCAATGGTCTCAAATCCAGCAAGGTGTTTCACAATCTGGAAATTTACAGGCGGCAGGCAGGGCTGCTGCACCGGCTGCCCGACAAGGTATTTCCCATGCTAGGAATGTTCCTCCAGCTGGTACCACTGCTCATACCCAACAAGCTAGGGGTTTGGCTGCTCATCAGCCTGCTAGACGGACACCACCACTAGTTCCTGTCCAAAATCAAAGCAGTGTTGCAGGCACACCTTATGCAAGTGAGAGGGATCAAAAAAGAGGAAACACAGCACAGTCAGTTTCTCGGCCTGATGAATTATTCAGTACGCCATCAGAACAGAATTGGGCTCCCACTGGACGAATGCGTGGAAGTCTAGATTTAAGTCAGCCTTACGATGAGTCTATTGCGCAGCGAATAATTACGCCAACACAAACTCAAACTTCAAGGCCACCACCACCTCCACAACCTCTCCGACGGACCCAACAGGATTTGCTTATTGCTAACAATAGAAATGCAAATGCTCATAATCGTACTTCCAGCTGA 2661 0.4378 MNGVAGLPLPPNSSPSVINMYRINKVTERLAWLAQPGNRGDPKEFYNHCLSLSRGIDYALANGEIPGNAPELPLLVKQICQLKNDELSQAALMVLLISVKGACEIGWFQSKESEELLTIVDEIGKVYSSVGTINARPRQCSSEISTIMEKFYPNVKLGSILASIEVQEPGYGASVVDFHITKSEFVKDKIFLLVAQIDNIEISACLISPQQVNFLLNGKGVINRTNVQMDPGPQMPTDVTGMLKFGTNLLQAVGHFTGRYTVLIAYMSFTPLHEDPVLQDYLQPVVTSVDSDSDIIEGASQISLNCPISFTRIKTPVKGRSCKHFQCFDFNNFISINSKRPSWRCPHCNQYVCYADIRLDRNMVEILKNVGESITEVIVLADGSWKAVMEKDHDVDKMQKKAPNYEKEQTEPQEYTCSPATVDLTEDDDHLETMDCSEIVDRKPFQASVQSQFAAPNSTSLGMNSPGVNRNVAAQIDDFFSGVYVARNRSDVPMVGTSELPVLPDTVSPAFNQESAGRDNNSAVNSAMRNQFLAPNNLQMQMNHMNSVNEYGRSSSVPRHITRTPVAVQALPVQSQALGLNNSLLSTNSSSSHIPLPSSTTTVDTLKAILSDTERQQRFSRSPMNLPQVSGVNSPAFRHHPATQNRVQVKNTSTPTQLQNQSRSTSTPTQLQNQSRSSSLSDFGNPHLQQALNLQPPRLPLNFRPPPPMRPSTTQWSQIQQGVSQSGNLQAAGRAAAPAARQGISHARNVPPAGTTAHTQQARGLAAHQPARRTPPLVPVQNQSSVAGTPYASERDQKRGNTAQSVSRPDELFSTPSEQNWAPTGRMRGSLDLSQPYDESIAQRIITPTQTQTSRPPPPPQPLRRTQQDLLIANNRNANAHNRTSS* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00390 886 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 25 464 - -
Phac2g00390 886 SUPERFAMILY RING/U-box 302 377 - -
Phac2g00390 886 MobiDBLite consensus disorder prediction 614 867 - -
Phac2g00390 886 MobiDBLite consensus disorder prediction 614 696 - -
Phac2g00390 886 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 274 387 IPR013083 -
Phac2g00390 886 MobiDBLite consensus disorder prediction 776 824 - -
Phac2g00390 886 MobiDBLite consensus disorder prediction 836 851 - -
Phac2g00390 886 CDD SP-RING_PIAS-like 303 350 - -
Phac2g00390 886 Pfam MIZ/SP-RING zinc finger 302 350 IPR004181 GO:0008270
Phac2g00390 886 ProSiteProfiles Zinc finger SP-RING-type profile. 291 372 IPR004181 GO:0008270
Phac2g00390 886 MobiDBLite consensus disorder prediction 713 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00390 Phac-Chr2 1957866 1969405 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00390 K04706 - gmx:100780539 1201.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g00390 2 1957866 1969405 Phac2g00390 2 1957866 1969405 ECH