Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03435 ATGCCCGAGATGGAGGAGGGCGAGGATATAGAGCAACCTCTGACGGCCATAGCAGAGGCGTTTGAGGAATTGTCTAAGTGGAGGAAGAAGGAGGTGCACCACATTCGTCTTGACACGTTCTGCGAAGCCGCCTCTCTGGTCTCCGTTCTCTTCCGGTGTCTTGGCCTGGCTTTTAAATTCGCGGAATTGGAATACATGGCGAAGCTGCAAGGTCTAGTGGAAGCATCAAAGACATGTCCGACTCTAGAGGATATCCTCGTGCTTGATGTTGCCAGTGATACAGTTAAAACATCTGGAAGCTATTCACGTAATCTGCGTAGGGTTCGGCAGGGTCTGGATCTTGTGAGAGCTATATTCGAACAGCTTTTATCCACCGACGATACTTCTCTGAAAGAAGTGGCTTCAACGGCTTATGGACAGGTTTGTGCTCCCTATCACACCTGGGCGGTTCGTACAGCTGTGTACGCAGGGATGTATACACTTCCAAGCAGAGATCAACTTTTGATGAAGCTGAATGAAACAGAGCAATCGGCAGAGAAGAAGATGAAAAGGTACATTGCTGCCTCACTTCCCATTATAGAATACATTGATAAACTCTATCTTTCTCGAAACATCACATTGGACTGGTGA 630 0.4762 MPEMEEGEDIEQPLTAIAEAFEELSKWRKKEVHHIRLDTFCEAASLVSVLFRCLGLAFKFAELEYMAKLQGLVEASKTCPTLEDILVLDVASDTVKTSGSYSRNLRRVRQGLDLVRAIFEQLLSTDDTSLKEVASTAYGQVCAPYHTWAVRTAVYAGMYTLPSRDQLLMKLNETEQSAEKKMKRYIAASLPIIEYIDKLYLSRNITLDW* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03435 209 Coils Coil 164 188 - -
Phac1g03435 209 Pfam Glycolipid transfer protein (GLTP) 35 173 IPR014830 GO:0005737|GO:0120009|GO:0120013
Phac1g03435 209 FunFam Accelerated cell death 11 5 209 - -
Phac1g03435 209 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 11 199 IPR014830 GO:0005737|GO:0120009|GO:0120013
Phac1g03435 209 Gene3D Glycolipid transfer protein 5 209 IPR036497 -
Phac1g03435 209 SUPERFAMILY Glycolipid transfer protein, GLTP 33 208 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03435 Phac-Chr1 40726803 40728084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03435 10 209 Acyl Lipid Metabolism Gene Families AT4G39670 66.990 1.42e-98 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03435 - - gmx:100813626 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g03435 1 40726803 40728084 Phac1g03435 1 40726803 40728084 ECH
Phac1g03435 1 40726803 40728084 Phac9g00942 9 7177908 7187035 PCT