Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03258 ATGGCCAAGGAACCTTCTCTGTGCCTCTTCCTCCTCTCTTTTCTCATTCTTCTCTCTTCCGGGACTGCATCTTCACCCTCGCTTGCTACCGCATTCCTCCACAAAACCAAGATCTCCAAATCTGAGATTCGGCTTTCTGTTACTGATTACAACATTTTCAACACTCTCACTGCCACCGACCTGCCAGTTGATTTCTTCTTAAACGAAAGCCTGGTTGAAAATTTTGTTTCTTCAAAATCATCTCCAGTTGCATGGCTGAAAGTTCATCTTTTGAACATTCTTCCACAAGTGGACATCAGAAGCATCATTGTTAGATGTGGCAGTGAGTGCTTAGGCCGAGATGAGATGCCTTTACTCATACCTGTTATGGAATCAGTTCATTCGTTTCTCAGCAATCTTCAACTAGGGAGGGAAGTTAAAGTCTCAGTGTCATTTCCGCTTTCGTTCTTAGAGAATTTGAATGCATCATATGAAAATGAGCTTCTTAGGATTGTTGCTTTTGTGAAGAAAATAGATTCATTTATCATGCTAGAAGACGCCATTGATGGGGAATCGGGAACTGTTCAGTCTGTTATTGAAAGAGCCACACTTGCTTGTATTCTTCCTTGCAAAGATGTTCCTGTGGTTTTCGCAATCAAGAGCAGTGGTATTCCCGCTTCAATGGAATTAGCTCAATTTAGTGAGGCAGTATCCAAATATTTTGAAGCAGGATCTCCTTTTACTAAAAGGATTGCTGCATTGTATGCAGAAGTACAGACAACCAAAGGTTTTGTACTGGAAGATCTAAAAAGAGTAGAGGGAGAAGGGATAATTCCTTTTATCCTAAGAGAAAAGCCAAGCAAAGGCCACATCAGAAGAATTCTCCAAGTCACAACCAACTCACCTACCACAGTTTCCCCCACAAATCCAACCCCACCTTCACCAGTCATCTCACCTCCAGATACACCAACCATCATCACAGTTCCTTCCACCAATCCTGTCACAGTTTCCCCCACTAATCCAGGAGCAACACCTGTGACAGTTCCTTCTACCACACCTGCTGTTCCCTTAGCCCCTGTAAATCCAGCCAATCCAGGGGCCCAACCAGTCACCAACCCTGCGAGCTCTTATCCACCCCCATCAGGAAATGGTCCTGTCACAAATGCCCTTCCTCCTCCTCCAAACACAAATTCTCAAGCCATGCCAGGGGGGCAGAGTTGGTGTGTGGCAAAGACTGGAGTTTCAGAAGCTACTCTTCAATCAGCACTGGACTATGCTTGTGGAATGCCAAGTGTAGATTGTTCACAAATACAGCAAGGTGGAAGTTGTTACAATCCAAATTCATTACAAAACCATGCTTCGTTTGCCTTCAACAGCTACTACCAGAAGAATCTTGCGTCAACAAGCTGTGACTTTGGAGGCGCAGCAACCATTGTTAACACCAATCCAAGCTCGGGTTCTTGCATTTATCCATCTTCTTCAGGGGCAGGCACATCCGGCTCTATTGGCTCGCCTTCAGTTTCAGGATCCCAAAGCCCTCCTGATTTAAATACCTCAAATTCAGCTGCTCTGAGGCCTTTTCTTGACCATATGGTTCTGGTAGTAATATCCTTAGTCAGCGTAAGACTCACTATATGA 1617 0.4447 MAKEPSLCLFLLSFLILLSSGTASSPSLATAFLHKTKISKSEIRLSVTDYNIFNTLTATDLPVDFFLNESLVENFVSSKSSPVAWLKVHLLNILPQVDIRSIIVRCGSECLGRDEMPLLIPVMESVHSFLSNLQLGREVKVSVSFPLSFLENLNASYENELLRIVAFVKKIDSFIMLEDAIDGESGTVQSVIERATLACILPCKDVPVVFAIKSSGIPASMELAQFSEAVSKYFEAGSPFTKRIAALYAEVQTTKGFVLEDLKRVEGEGIIPFILREKPSKGHIRRILQVTTNSPTTVSPTNPTPPSPVISPPDTPTIITVPSTNPVTVSPTNPGATPVTVPSTTPAVPLAPVNPANPGAQPVTNPASSYPPPSGNGPVTNALPPPPNTNSQAMPGGQSWCVAKTGVSEATLQSALDYACGMPSVDCSQIQQGGSCYNPNSLQNHASFAFNSYYQKNLASTSCDFGGAATIVNTNPSSGSCIYPSSSGAGTSGSIGSPSVSGSQSPPDLNTSNSAALRPFLDHMVLVVISLVSVRLTI* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03258 538 Gene3D - 393 489 - -
Phac1g03258 538 Gene3D Glycosidases 19 178 - -
Phac1g03258 538 MobiDBLite consensus disorder prediction 365 391 - -
Phac1g03258 538 MobiDBLite consensus disorder prediction 324 396 - -
Phac1g03258 538 MobiDBLite consensus disorder prediction 324 344 - -
Phac1g03258 538 SMART X8_cls 399 483 IPR012946 -
Phac1g03258 538 FunFam Glucan endo-1,3-beta-glucosidase 4 395 487 - -
Phac1g03258 538 PANTHER BETA-1,3 GLUCANASE 394 494 IPR044788 -
Phac1g03258 538 Pfam X8 domain 400 470 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03258 Phac-Chr1 39812841 39816310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03258 41 486 Glycoside Hydrolase AT2G05790 25.751 1.94e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03258 - - gmx:100789503 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g03258 1 39812841 39816310 Phac1g03258 1 39812841 39816310 ECH
Phac1g03258 1 39812841 39816310 Phac7g03218 7 34882567 34886197 PCT