Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03230 ATGCTGCGTCTGAAAGCGTTTCGGCCTACGAACGAAAAAATCGTTAAGATCCAATTGCATCCGACGCATCCATGGATGGTTACCGCCGATGATTCAGATCGAGTTTCGGTTTGGAACTGGGAGCACCGCCAGGTGGTGTATGAGTTGAAAGCTGGTGGAGTGGACGAGCGGCGTTTGGTCGGCGCAAAGTTGGAGAAGCTGGCCGAGGGAGAAACAGAGTCAAAAGGGAAGCCTACGGAAGCCATTCGGGGAGGAAGTGTTAAGCAGGTGAATTTTTATGATGATGATGTGCGCTTTTGGCAACTTTGGCATAATCGTTCTGCAGCTGCTGAGGCTCCAACAGCTGTCCACACTTCAGCTTTTAGCTCTCCTGCTCCATCAACAAAAGGGAGACATTTTCTTGTCATATGTTGTTTAAACAAAGCTATATTTTTAGACTTGGTGACAATGCGTGGCCGTGATGTACCAAAGCAAGAGCTTGATAACAAGTCCCTTCTATGCATGGAGTTCCTTTATAGAACTGGTGTTGGTGATGGTCCTCTTGTTGCTTTTGGTGCATCAGATGGTGTCATTAGAGTTCTCTCAATGATGACATGGAAGCTTGTGCGAAGGTACACTGGAGGTCATAAAGGATCTATCTCTTGCTTGATGTCCTTCATGGCTGCTTCTGGCGAGGCTCTTCTGGTTTCGGGCGCTAGTGATGGATTGCTCATAATTTGGAGTGCTGACCACGGACAGGATTCACGTGAACTTGTGCCCAAGCTGAGTTTAAAAGCACATGATGGAGGGGTTGTGGCAGTTGAGTTGTCAAGGGTAATGGGAGGTACTCCTCAGCTAATCACAATTGGTGCAGATAAGACATTAGCCATATGGGACACTGTGTCCTTTAAGGAGCTGCGGCGTATAAAGCCAGTTCCCAAATTGGCTTGCCATAGTGTAGCTTCTTGGTGCCATCCTCGAGCTCCAAACCTTGACATTCTAACCTGCGTCAAAGATTCTCACATATGGGCAATCGAACATCCCACTTATTCTGCTCTCACGAGGCCATTGTGTGAATTGACCTCAGTTCTTCCTCCAAATGCCCTTGCTCCTAATAAGAAATTGAGGGTGTATTGTATGGTTACACATACTTTGCAGCCACATCTTGTTGCTACTGGAACCAACATTGGTGTTATTATCTGTGAGTTTGATGCTAGATCTCTTCCACCTGTAGCTCCTCTACTAACTCCAGCAGACAGTAGAGAGCATTCAGCTGTATTTGTAATTGAAAGGGAATTGAAGCTATTAAATTTTCAGTTAAACAACTCTGCAAATCCATCTCTTGGAAATAACAGTTCCTTGTCAGAAACAGGAAGACCCAAGGGAGACTTTTTTGAACCATTACCTGTCAAGCAGGGGAAAAAGCACATTAGTACTCCTGTTCCTCATGATTCGTACTCAGTTCTTTCTGTCAGCAGTTCAGGAAAGTATCTAGCAATTGTTTGGCCAGATATTCCTTATTTTTCTGTCTACAAGGTTAGTGATTGGTCAATTGTTGACTCTGGAAGTGCAAGGCTTCTGGCATGGGATACTTGTCGTGACAGATTTGCTATATTGGAATCAGCATTACCTCCTAGACTTCCTATAATTCCAAAGGGTAGTTCATCAAAAAGAGCCAAAGAAGCTGCTGCAGCACAAGCAGCAGCAGCAGCTGCTGCTGCTGCTGCTTCCACAGCTTCTGTTCAAGTTCGCATCTTGTTAGATGATGGTACATCAAACATACTAATGAGGTCCGTTGGCGCACGCAGTGAACCAGTCATTGGTTTGCGTGGAGGAGCACTGCTCGGTGTTGCGTATCGAACATCTAGGAGAGTCAGTCCTATTGCTGCCACAGCTATTTCAACAATCCAGTCTATGCCCTTATCAGGCTATGGAAGCAGTGTTTCTTCTTTTACTACTTATGATGATGGATTTTCTTCAAATAGACCTCCAACCACAGCAGCACCTCAAAACTTCCAGTTATACAGTTGGGAGACATTCCAGCCAGTGGGGGACCTTCTTCCTCAACCAGAATGGACTGCTTGGGACCAAACCGTTGAGTACTGTGCATTTGCATACCAGCAATACATAGTCATATCTTCTTTGCGCCCTCAATATAGATATTTGGGAGATGTTGCAATCCCATATGCAACCAGTGCTGTTTGGCACAGGAGGCAACTATTTGTGGCTACCCCAACCACTATCGAAATTGTTTTTGTGGACGCAGGGATTGCCCAAATTGACATTGAAACTAAGAAGATGAAAGAAGAGCAGAAAATGAAAGAAGCGCAGGCAAAAGCTGTTGCAGAGCACGGAGAGTTAGCACTAATTAGTGTAGAAGGTCCTCAGTCTGCTAAGGAAGAAAGAATAGCATTGAGGCCACCGATGTTGCAGGTGGTTCGGTTGGCTTCATTTCAGCATGCTCCTTCAGTGCCACCTTTCTTAACATTACCGAAACAATCTAGAGTTGATGGTGATGACTCTTGGACGGCAGCAGAAGAGAGAAAGGCAGGTGAGGTGGCAGTTGGAGGTGGGGGTGTGTCTGTGGCAGTTACCCGTTTTCCAATGGAGCAGAAACGTCCAGTTGGGCCTCTTGTAGTTGTAGGTGTCAAGGATGGAGTTCTTTGGCTAATTGACAGGTACATGTGTGCTCATGCCTTATCCTTGAGTCATCCTGGTATTCGCTGCCGATGCCTTGCTGCTTACGGAGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGACTTGGAAGAGAACACCATGATGATTTAGCACAATTTATGCTAGGAATGGGCTATGCTACTGAAGCACTTCATTTGCCTGGAATATCAAAGAGGTTGGAGTTTGATTTGGCAATGAAGAGCAATGATTTGAAAAGAGCTCTTCATTGTCTTCTTACCATGAGTAACAGCCGGGATATAGGACAAGATGATACACCTGGGCTTGGTTTGAATGACATTCTTAATTTATCAGATAAAAAACAAGAGAAAATATCAGATAAAAAACAAGATATGGTTGAAGGTGTTCAGGGTATAGTGAAATTTGCGAAAGAATTCTTGGATCTTATTGACGCTGCAGATGCTACTGCACAGAGTGAAATAGCCCGTGAGGCTCTCAAGAGGTTAGCTACAGCAGGTTCGGTGAAAGGTGCTTTAGAAGGTCATGAATTGAGAGGATTAGCATTACGTCTTGCAAATCATGGAGAGTTGACTCGTCTAAGTGGTTTGGTAAACAACTTAGTCACCCTTGGCTTGGGACGGGAAGCAGCATTCGCTGGTGCTGTTTTGGGTGACAATGCTCTGATGGAGAAAGCATGGCAGGATACTGGAATGCTGGCAGAGGCCGTGCTTCATTCCCATGCACATGGACGTCCAACTTTGAAGAACTTAGTTCAGGCTTGGAACCAAGCGCTACAGAGAGAGATTGAACCTACCCCATCTCAGAAGACAGATGCTGCAGCTGCGTTTTTAGCTTCTCTTGAGGAGCCTAAGCTCACGAGTTTGGCTGATGCTGGGAAGAAAGCGCCTATTGAAATCCTGCCTCCGGGGATGATGTCTCTTAATGCTCCTATTTCCATCCAGAAAAAACCAGCTTCTGCTGCACAGAATTCCCAACAACCCCCAGACAAGCAGTTGGCACTGGAAGCACCTCCTACAACCACAGCTGCACCAGAGAGTGCTACTCAGCAGCCTGAATCTACACCAGCATCCGTTACTGATCCACCTCCGGCAGAGTCTACCTCCTCAGACTCCACGCCAGCTCCTGTAGCTTCTCCACCTCAACAAGAATCAGGTGAAACCACAGTAGATGATGGGGCTCCTACCACTGGATCAGCTATTGACGGAGATCCAAATGTTAATGGTGAAACTAGTCAAGCAGAAGCGTCTACCGGCAATCCAGCAACCCCAGAGGTTCCACCACCTCCAGTAGCAGCAGAGGTTTTGGAGACTTCTACTCCAACTACAGCTGCAGTGCCTACAATAACTACAGTTCCCTCAAATGATCCGTTTATATGA 4032 0.4603 MLRLKAFRPTNEKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVVYELKAGGVDERRLVGAKLEKLAEGETESKGKPTEAIRGGSVKQVNFYDDDVRFWQLWHNRSAAAEAPTAVHTSAFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRTGVGDGPLVAFGASDGVIRVLSMMTWKLVRRYTGGHKGSISCLMSFMAASGEALLVSGASDGLLIIWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGTPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTSVLPPNALAPNKKLRVYCMVTHTLQPHLVATGTNIGVIICEFDARSLPPVAPLLTPADSREHSAVFVIERELKLLNFQLNNSANPSLGNNSSLSETGRPKGDFFEPLPVKQGKKHISTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESALPPRLPIIPKGSSSKRAKEAAAAQAAAAAAAAAASTASVQVRILLDDGTSNILMRSVGARSEPVIGLRGGALLGVAYRTSRRVSPIAATAISTIQSMPLSGYGSSVSSFTTYDDGFSSNRPPTTAAPQNFQLYSWETFQPVGDLLPQPEWTAWDQTVEYCAFAYQQYIVISSLRPQYRYLGDVAIPYATSAVWHRRQLFVATPTTIEIVFVDAGIAQIDIETKKMKEEQKMKEAQAKAVAEHGELALISVEGPQSAKEERIALRPPMLQVVRLASFQHAPSVPPFLTLPKQSRVDGDDSWTAAEERKAGEVAVGGGGVSVAVTRFPMEQKRPVGPLVVVGVKDGVLWLIDRYMCAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGISKRLEFDLAMKSNDLKRALHCLLTMSNSRDIGQDDTPGLGLNDILNLSDKKQEKISDKKQDMVEGVQGIVKFAKEFLDLIDAADATAQSEIAREALKRLATAGSVKGALEGHELRGLALRLANHGELTRLSGLVNNLVTLGLGREAAFAGAVLGDNALMEKAWQDTGMLAEAVLHSHAHGRPTLKNLVQAWNQALQREIEPTPSQKTDAAAAFLASLEEPKLTSLADAGKKAPIEILPPGMMSLNAPISIQKKPASAAQNSQQPPDKQLALEAPPTTTAAPESATQQPESTPASVTDPPPAESTSSDSTPAPVASPPQQESGETTVDDGAPTTGSAIDGDPNVNGETSQAEASTGNPATPEVPPPPVAAEVLETSTPTTAAVPTITTVPSNDPFI* 1344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03230 1343 MobiDBLite consensus disorder prediction 1199 1215 - -
Phac1g03230 1343 MobiDBLite consensus disorder prediction 1199 1343 - -
Phac1g03230 1343 MobiDBLite consensus disorder prediction 1226 1304 - -
Phac1g03230 1343 SUPERFAMILY WD40 repeat-like 6 508 IPR036322 GO:0005515
Phac1g03230 1343 MobiDBLite consensus disorder prediction 1320 1343 - -
Phac1g03230 1343 PANTHER TSET COMPLEX MEMBER TSTF 1 1257 - -
Phac1g03230 1343 Coils Coil 752 772 - -
Phac1g03230 1343 Gene3D - 3 352 IPR015943 GO:0005515
Phac1g03230 1343 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
Phac1g03230 1343 Gene3D - 903 1160 - -
Phac1g03230 1343 SMART WD40_4 250 292 IPR001680 GO:0005515
Phac1g03230 1343 SMART WD40_4 1 39 IPR001680 GO:0005515
Phac1g03230 1343 SMART WD40_4 198 241 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03230 Phac-Chr1 39628558 39648268 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03230 - - gmx:100786844 2358.18