Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03197 ATGACATCTTCATTCTCTCCCATTCTTCCCTTCTTCTCCACCTTATTATGTTTCTCTTTTGCTCTTCTCTTCTCTGCAACTTTAGGAGCTGAAGCTTGGTCCAAGCCCCACATACCCATCTCTTCTCTCATCACCAAAAGTCTTTTTGACTCCTTTTTCCTTCACAAAGATGACACTGCATGCCCTGCCAAAGACTTCTACACCTACGACTCCTTCATTCGTGCATCAAAATCCTTCCCTGCATTTGGTACCACTGGTTGTTTAGCCACGCGCAAGCGTGAGATTTCTGCGTTTCTGGCTCAGATTTCCCATGAAACCACTGGTGGGTGGGCCACTGCACCTGATGGCCCATTTGCTTGGGGCTTGTGCTTCAAGGAGGAAATTAGTCCTCAGACTAATTACTGCGATTCTACTAACACCCAATGGCCTTGCTTCCCTGGCAAAAGTTACAAGGGAAGAGGACCAATTCAGCTTTCTTGGAACTACAACTATGGACCAGCAGGGAAGGCGCTGGGATTTGATGGGCTGAGGAATCCAGAGATTGTGGCGAACAATTCTGTGATAGCCTTCAAAACTGGTCTGTGGTTTTGGATGACAGAGCAAAAGCCGAAACCTTCTTGCCACGACGTTATGGTTGGGAAATACGTGGCTACAGAAGCTGACATAGCAGCGAATCGAACATCTGGTTATGGGTTGGTCACTAACATAATCAATGGTGGACTGGAATGTGGGATTCCTGGTGATGCAAGAGTCAATGATCGGATTGGGTTTTTCCAAAGATATACAAAGTTGCTCAACGTGGACACTGGACCTAACTTGGATTGTGCATATCAGGAACCCTTCTAA 846 0.4645 MTSSFSPILPFFSTLLCFSFALLFSATLGAEAWSKPHIPISSLITKSLFDSFFLHKDDTACPAKDFYTYDSFIRASKSFPAFGTTGCLATRKREISAFLAQISHETTGGWATAPDGPFAWGLCFKEEISPQTNYCDSTNTQWPCFPGKSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSVIAFKTGLWFWMTEQKPKPSCHDVMVGKYVATEADIAANRTSGYGLVTNIINGGLECGIPGDARVNDRIGFFQRYTKLLNVDTGPNLDCAYQEPF* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03197 281 Pfam Chitinase class I 43 275 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phac1g03197 281 CDD chitinase_GH19 44 275 - -
Phac1g03197 281 PIRSF Endochitinase 15 281 IPR016283 GO:0004568|GO:0005975
Phac1g03197 281 PANTHER CHITINASE-RELATED 39 279 - -
Phac1g03197 281 Gene3D Endochitinase, domain 2 126 184 - -
Phac1g03197 281 ProSitePatterns Chitinases family 19 signature 2. 188 198 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phac1g03197 281 SUPERFAMILY Lysozyme-like 40 281 IPR023346 -
Phac1g03197 281 Gene3D - 47 281 - -
Phac1g03197 281 FunFam Endochitinase (Chitinase) 126 184 - -
Phac1g03197 281 ProSitePatterns Chitinases family 19 signature 1. 61 83 IPR000726 GO:0004568|GO:0006032|GO:0016998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03197 Phac-Chr1 39453026 39454347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03197 15 281 Glycoside Hydrolase AT1G02360 69.259 1.62e-144 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03197 - - gmx:100784196 517.694