Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02962 ATGTACGCGCCTTTCGCTTCTCTATCCAGTTACTCAGTGGCCATGAATAGCTTAACGGCGAGTTTTACAGCTCGAATATGCAACACGCGCCGCGACCTACTCCCTATGCGACGCCGTTCCTCATTCGGTCGCGTCGCCACCAAACTCGCACATCCAAGAATCGTGTGCATGGCGGAACCTTATCTGATAACGAAATTGGAATCTGCCGAGAAAACCTGGAAAGAGTTATCGGTCAAGCTTGCTGATCCAGACGTTGTGTCTGATCCAAAGGAGTATCAGAAGTTAGCGCAATCAGTGGCAGAGCTTGATGAGGTTGTGTCCATCTATAGGAAATTTAAAGACTGTGAGAAGCATCTAGAAGAAGCCAAAGCTTTAGCGAAGGATGGAGGAAATGACGAGGATATGGTAGAAATGATATCTTATGAAATCGACTTGTTGTCCAAGCAACTAGCTGAGCTTGAGGAAAACCTTAAGGTGCTACTGCTTCCCAGTGATCCTCTAGATGCTAGAAACATTATGATTGAAGTACGAGCAGGCACTGGTGGTGATGAGGCTGGAATATGGGCTGGTGATCTTGTCCGAATGTATGAAAGATATAGTGAAAGGAATTCTTGGAAGTATTCTCTCGTCTCAAGCTCTGCGGCAGAAAAAGGAGGATACAAAACTTATGTAATGGAGATAAAAGGAAATCGTGTTTACAGTAAATTGAAATATGAATCTGGTGTCCACCGAGTTCAACGTGTTCCTCTAACAGAAGCACAGGGCCGGGTACATACTTCTACTGCAACAGTGGCTATCATGCCAGAGGTTGATGAAGTTGAAGTCGTAATTGACCCCAAAGACATTGAACTGACGACGGCACGTTCTGGGGGTGCCGGAGGGCAGAATGTTAACAAGGTTGAAACAGCCATCGATCTCGTCCATAAACCAACGGGAATTCGCATCTTTTGTACTGAAGAAAGAACACAACTTAAAAACAAGAATCGTGCTTTTCAGTTGCTCCGAGCAAAACTATATGAGATAAAGCTAAGGGAGCAGCAGGAGTCACTACGAAATCAAAGGAAATCACAGGTCGGTACAGGTGCACGAGCAGAAAAAATTCGGACATACAATTATAAGGACAACAGGGTTACTGACCACAGATTGAAGACAAACTATGAGCTCACCTCTTTTCTTGATGGTGACATAGAAGATGCTGTTCAGTCTTGCGCTACAATGGAGCAAAAGGAACTTCTGGAAGAACTTGCTGAATCTGTAGGTGCTACGGCTCTCTGA 1275 0.4486 MYAPFASLSSYSVAMNSLTASFTARICNTRRDLLPMRRRSSFGRVATKLAHPRIVCMAEPYLITKLESAEKTWKELSVKLADPDVVSDPKEYQKLAQSVAELDEVVSIYRKFKDCEKHLEEAKALAKDGGNDEDMVEMISYEIDLLSKQLAELEENLKVLLLPSDPLDARNIMIEVRAGTGGDEAGIWAGDLVRMYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTEAQGRVHTSTATVAIMPEVDEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLVHKPTGIRIFCTEERTQLKNKNRAFQLLRAKLYEIKLREQQESLRNQRKSQVGTGARAEKIRTYNYKDNRVTDHRLKTNYELTSFLDGDIEDAVQSCATMEQKELLEELAESVGATAL* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02962 424 PANTHER LD18447P 57 418 - -
Phac1g02962 424 FunFam Peptide chain release factor 1 278 343 - -
Phac1g02962 424 Gene3D - 174 400 - -
Phac1g02962 424 FunFam Peptide chain release factor 1 340 419 - -
Phac1g02962 424 FunFam Peptide chain release factor 1 168 278 - -
Phac1g02962 424 Coils Coil 136 156 - -
Phac1g02962 424 Hamap Peptide chain release factor 1 [prfA]. 62 416 IPR004373 GO:0006415|GO:0016149
Phac1g02962 424 Gene3D - 270 365 - -
Phac1g02962 424 Pfam PCRF domain 70 264 IPR005139 GO:0006415
Phac1g02962 424 NCBIfam peptide chain release factor 1 58 417 IPR004373 GO:0006415|GO:0016149
Phac1g02962 424 SUPERFAMILY Release factor 71 412 IPR045853 -
Phac1g02962 424 Coils Coil 336 356 - -
Phac1g02962 424 Gene3D - 56 166 - -
Phac1g02962 424 SMART PCRF_a_2 124 239 IPR005139 GO:0006415
Phac1g02962 424 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 288 304 IPR000352 GO:0003747|GO:0006415
Phac1g02962 424 Pfam RF-1 domain 271 381 IPR000352 GO:0003747|GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02962 Phac-Chr1 38201154 38209539 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02962 K02835 - gmx:100777225 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02962 1 38201154 38209539 Phac1g02962 1 38201154 38209539 ECH