Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02952 ATGGATAGAGTTAAGGACTTGGCTTCAAAGAAGGCTGCTGTTATTTTCACCAAGAGTTCATGTTGCATGTGTCACAGCATCAAGCAACTTTTCTATGAGCTTGGAGCAAGCCCAGCAGTTCATGAGCTTGACAATGATTCCTATGGGAGGGAAATGGAGTGGGCTTTAAGGGGTATGGGCTGTAATCCTTCAGTCCCAGCAGTGTTCATAGGTGGAAAATTTGTGGGGTCGTCCAAAGATGTCATATCCCTCCATGTTGATGGCTCTCTCAAACAATTGCTCATGGATGCAAAGGCCATCTGTGTCCTCCTTAAATTGTACCAAAACAAAGAACAGAATTCTGTACATATATATTTAGAAGAACAGGTGCTTGATCAGTGTATCAGGATGGACAAGGTGAAGAGGTTGGCCAATGAAAACGGTGTGGTGATTTTCACAAAGAGCTCTTGTTGCCTCTGCTATGCAGTCAACATTCTGTTTGAAGAACTTGGGGTGAAACCTCAGCTTCATGAGATTGATCATGACCCTGAAGGCAGAGAAATGGAGAAAGCTCTAATGAGGCTAGGCTGCAATGCTCCAGTCCCAGCTGTATTCATCGGGGGGAAGCTAATTGGATCCACCAATGAAATCATGTCCCTCCACCTTCGTGGTTCACTCACTCCATTGTTGAAAACTCACTAG 681 0.4464 MDRVKDLASKKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDNDSYGREMEWALRGMGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQLLMDAKAICVLLKLYQNKEQNSVHIYLEEQVLDQCIRMDKVKRLANENGVVIFTKSSCCLCYAVNILFEELGVKPQLHEIDHDPEGREMEKALMRLGCNAPVPAVFIGGKLIGSTNEIMSLHLRGSLTPLLKTH* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02952 226 Gene3D Glutaredoxin 128 226 - -
Phac1g02952 226 ProSiteProfiles Glutaredoxin domain profile. 130 226 - -
Phac1g02952 226 FunFam Glutaredoxin family protein 130 226 - -
Phac1g02952 226 CDD GRX_GRXh_1_2_like 12 93 - -
Phac1g02952 226 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Phac1g02952 226 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Phac1g02952 226 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Phac1g02952 226 SUPERFAMILY Thioredoxin-like 1 99 IPR036249 -
Phac1g02952 226 Gene3D Glutaredoxin 1 120 - -
Phac1g02952 226 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Phac1g02952 226 CDD GRX_GRXh_1_2_like 142 222 - -
Phac1g02952 226 NCBIfam glutaredoxin-like family 4 100 IPR011905 -
Phac1g02952 226 NCBIfam glutaredoxin-like family 133 225 IPR011905 -
Phac1g02952 226 Pfam Glutaredoxin 14 75 IPR002109 -
Phac1g02952 226 Pfam Glutaredoxin 142 204 IPR002109 -
Phac1g02952 226 PANTHER GLUTAREDOXIN 130 225 IPR011905 -
Phac1g02952 226 SUPERFAMILY Thioredoxin-like 130 225 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02952 Phac-Chr1 38160324 38163595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02952 130 224 Miscellaneous Gene Families AT4G15700 48.421 9.22e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02952 K03676 - gmx:100788094 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02952 1 38160324 38163595 Phac7g02583 7 29808793 29809110 PCT
Phac7g02585 7 29857192 29858706 Phac1g02952 1 38160324 38163595 PCT