Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02947 ATGAGCAGCCAGTCCAAGACCAACGTGGATGGAGTGCACACTGATGTCAAGGTGGTGGAGAGCCCAACCAAAGAAAGACCCTACGATCTCTTGCTGCGCTTTCTCGGCCTCTCACTCACTCTTGTTGCAACCATCGTTGTTGCTGTCGACAATGAGACCAAACTCATCTCCTACGCTGAGATGCAATTCAAAGCCACTGCTAAGTGGGAATATTTGTCTGCTATGGTGTTTTTCGTGGTGTCAAACGCAGTAGCATGCTCATATGCAGCTGCATCATTGGTGATAACAGTGATGGCAAGAAACAGTGGAAGAAGAAAAAGCGATGTGACTCATTTGGTGGTAACCGCTTTAGACCTTGTGTTGATGGCAGTGTTGTTCTCAGCCAATGGTGCAGCTTGTGCAGTGGGAGTGATAGCACAGAAGGGTAACACGCACGTGCAATGGATGAAAGTGTGCGACGTCTTTGACGCCTATTGCCGCCACGTGAAAGCTGCATTGGTCCTCTCCATTATTGGCTCCACGGTGTTTCTCTTGCTGGTGCTGCATTCTGTTCTCAAACTCCATTACAGATCAAGAAGCTAG 582 0.4863 MSSQSKTNVDGVHTDVKVVESPTKERPYDLLLRFLGLSLTLVATIVVAVDNETKLISYAEMQFKATAKWEYLSAMVFFVVSNAVACSYAAASLVITVMARNSGRRKSDVTHLVVTALDLVLMAVLFSANGAACAVGVIAQKGNTHVQWMKVCDVFDAYCRHVKAALVLSIIGSTVFLLLVLHSVLKLHYRSRS* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02947 193 PANTHER CASP-LIKE PROTEIN 1U1 21 188 IPR044173 -
Phac1g02947 193 Pfam Casparian strip membrane protein domain 26 173 IPR006702 -
Phac1g02947 193 NCBIfam plant integral membrane protein TIGR01569 30 186 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02947 Phac-Chr1 38133734 38135218 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02947 - - gmx:100784906 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02947 1 38133734 38135218 Phac1g02947 1 38133734 38135218 ECH