Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02930 ATGGCCATAGGTTCTTCGCCTCACTCTCAAACTTCATCACCCCCTGCCGGATATAAAGTTAAATATGCAAGTGACGACGATCCATCCAGGGAAACTGATCTCTTTCAGGACACCTTAGTGCTCAATAGTCCTTTCACTGAAACGGAGTATGAAAATCTCAATCTGGACACTGAGATTCTAGAGGATTCTGAGCCTGCTGAGGACATGACAACTGGAAAAATATGCGAGTATGGACAAGTTGTTCTGGATAGCGAGGATGAAGAAATGGATGATAGACATGTTGGCAAAGAATTTATTGAGGATGAAACAAGTCCAACAGTGAAAATTCCTTCCACTCTCTTCCAGAAAAGACAGTCCAAGCCACCTTGTGAGCAAGTGGAAGCAAACACCAACACTTTTGGGAGCTCTGCTGCTGGCGACAAAAGAACTTTAGTTGATTCGGACAGCTTTGATGACGACAACCATTTATATCCACCTGCAACCCTAGATCACATTCACTCACCAGAGTTTGGGGATTCAACCCAAGCTGCACTTGGCTTTGTGGATCAGTACTTGTCGTCAAATGATGTGGACTTGTTTCAAGGAGTTCATTGTGGAAATACCGCTAGGGAGAAATCACCTCATGTCCTGAATGCAAGAGGACCACTAAATCTTGCTAAGAAAATTAAAGCCCGAACTAAAAATGAAGAGAAAGAACCGTTCAAATTGGTTGACAGTTGCCAACATGACAACAGATGTCGTATGTTTAGTCAAAAAAGTGAAGCATCTTCAAATTTTGGAAGATACAAACAGACATATACGAGAAGGAAAAAGGGTGGCCATCTTAACTGTAGTACAAGTAATACATTTGATGGGAAGTTAGGCCAAGGACCAAGAATGGCAATTGAAAATGATAACTCTCTCAAGGAATTTAATGTTCATCCAAGTTCTATAAGAGACAATGCTGATGTTTATTCCGGTGAAACACATATAGAGGATATGTCTGATATTGGTTTAGGCACTCAAATAGCTGCTGAAGCAATGAATGCCTTAGCTTTAATGCCCCCTTATGGCTGCCAGTTCAATGATACCCATCAACCAGAGAATGCATTAGATGGCTCTTTGAGCGATTTGACAGAGAATGAAGCTCATCTGAAAAATTCTTCAAATATTCAGAATCCTAGTTTGCGTTCTATTACAATAAAATCAAATAAGAAAAATGCATCATCCTCTAGATTTAGTAAAATAACTTACAGCTCTTCTTCCAAGGACACTGACAAACAGGAGTCAAATGTTGTCTCTGGCAAAATGAAAAAAAGGATGAAAGGCAAGTCAACTGCTGAGGAGCGGTTTGAAAATAATAATAGTTTGCCGGTATGCAGTAAACATGTATTGCTTGAAGAGGTTTGCCCACTGGGAGAATACACAAGTTTCGAACCTGCTGCTGAAGAATCCGAACATAGGAACAATGAGAGTGGACATCAAAGAATCAAAGATCAACCAAGCCTTCGTACCGAGGAGAACAATAATGTCAAGGAGAAGGGTATTAAACACAAGAGAAAGGAGACTGGTTTAGAGGCTGATCCAGTGAAGTTGGGGGCTAGGACTAAGCGTCTTAAATTCCTTACCGACTCATGTATACTTTCTAAGAAAGTCAGGTTGAATCATCTTACTGAAGTTAGCCCAGAGTTATCTGCAACCCGCAGTTTTTCATGGACTGATTCTTGGGTTTATCCAAAAAGATCACGAGGGAAGAGAAAGGGGGCTAATATGGGAACCAAGCTCAATACTCCAACTGTTTTGTGTACTGATGGAAAAGAAAACAATGTATTCTCCACTAGAAGTATAGAGGACCAGGCCAATGCTTCATGTGTTGATGATGGCAGATGCTTGTTACAGGGAGACTTTGTAAAAACCCTGCCTAAGTCTTCACTCTTGAAAGAGCTTATCAGATTAGGAGTTCCTGAGTCCATGTCAGATATGATGTGGAAAGATCTGAGGCATCGAAGAGATATGACAGATGTTCGAGTTCTGTTTAGTCAGCATTTGGATGACAGTATCATTAAGCAGCAAAAAAAGATATTGAAGCGTCTCAATATATCTGTTGCATCGAGTTCAATGGAGGCCACACATTTCGTAGCTGACAAATTTACACGCACAAAGAATATGTTGGAAGCCATGGCTCTTGGGAAATTAATTGTGAATCACTTATGGCTTGAGAGCTGTGGACAAGCCAACTGTTTTATTGACGAGAAAAATTACATTCTGCGGGATATGAAAAAGGAAAAGGAAATAGGCTTCAACATGGCAGTTTCTCTTGCTCGCGCAAGACAAAAGCCACTCCTAAAGGGTAAAAGAGTCTACATCACGCCACATATTAAACCTGATAAGGAAGTGATTGCAAGCTTGGTCACAGCTGTTCATGGCCAGGTAGTAGATCAAAGTGAGGTGTGTGCTGACATGAATGATAAGATCTTAGATGATCTGATAGTTCTTTCTTGTGAAGACGACTATGCAATATGCCATCGTTTATTTAAGAGAGGAACTGCAGTTTACAGTTCAGAGCTTGTTCTGCATGGAATTGTAATCCAAAAATTGGAACTTGAGAGACATCAACTCTTCATGAATCAAGTTACAAGGAGTAGCAATTGTCCAAGTACGTCTAATCGGTTTGGGAAGGTTTACAGAAGGCGTCGAGGCCTTATCCTGGATTGTAGCTGA 2700 0.4074 MAIGSSPHSQTSSPPAGYKVKYASDDDPSRETDLFQDTLVLNSPFTETEYENLNLDTEILEDSEPAEDMTTGKICEYGQVVLDSEDEEMDDRHVGKEFIEDETSPTVKIPSTLFQKRQSKPPCEQVEANTNTFGSSAAGDKRTLVDSDSFDDDNHLYPPATLDHIHSPEFGDSTQAALGFVDQYLSSNDVDLFQGVHCGNTAREKSPHVLNARGPLNLAKKIKARTKNEEKEPFKLVDSCQHDNRCRMFSQKSEASSNFGRYKQTYTRRKKGGHLNCSTSNTFDGKLGQGPRMAIENDNSLKEFNVHPSSIRDNADVYSGETHIEDMSDIGLGTQIAAEAMNALALMPPYGCQFNDTHQPENALDGSLSDLTENEAHLKNSSNIQNPSLRSITIKSNKKNASSSRFSKITYSSSSKDTDKQESNVVSGKMKKRMKGKSTAEERFENNNSLPVCSKHVLLEEVCPLGEYTSFEPAAEESEHRNNESGHQRIKDQPSLRTEENNNVKEKGIKHKRKETGLEADPVKLGARTKRLKFLTDSCILSKKVRLNHLTEVSPELSATRSFSWTDSWVYPKRSRGKRKGANMGTKLNTPTVLCTDGKENNVFSTRSIEDQANASCVDDGRCLLQGDFVKTLPKSSLLKELIRLGVPESMSDMMWKDLRHRRDMTDVRVLFSQHLDDSIIKQQKKILKRLNISVASSSMEATHFVADKFTRTKNMLEAMALGKLIVNHLWLESCGQANCFIDEKNYILRDMKKEKEIGFNMAVSLARARQKPLLKGKRVYITPHIKPDKEVIASLVTAVHGQVVDQSEVCADMNDKILDDLIVLSCEDDYAICHRLFKRGTAVYSSELVLHGIVIQKLELERHQLFMNQVTRSSNCPSTSNRFGKVYRRRRGLILDCS* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02930 899 ProSiteProfiles BRCT domain profile. 660 749 IPR001357 -
Phac1g02930 899 MobiDBLite consensus disorder prediction 1 17 - -
Phac1g02930 899 MobiDBLite consensus disorder prediction 117 140 - -
Phac1g02930 899 CDD BRCT_MDC1_rpt1 668 742 - -
Phac1g02930 899 Gene3D BRCT domain 656 772 IPR036420 -
Phac1g02930 899 MobiDBLite consensus disorder prediction 474 511 - -
Phac1g02930 899 MobiDBLite consensus disorder prediction 403 421 - -
Phac1g02930 899 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 131 866 - -
Phac1g02930 899 SUPERFAMILY BRCT domain 657 764 IPR036420 -
Phac1g02930 899 MobiDBLite consensus disorder prediction 422 442 - -
Phac1g02930 899 MobiDBLite consensus disorder prediction 117 138 - -
Phac1g02930 899 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 662 749 IPR001357 -
Phac1g02930 899 MobiDBLite consensus disorder prediction 403 445 - -
Phac1g02930 899 MobiDBLite consensus disorder prediction 1 31 - -
Phac1g02930 899 CDD BRCT_PAXIP1_rpt6_like 774 860 - -
Phac1g02930 899 Gene3D BRCT domain 773 874 IPR036420 -
Phac1g02930 899 SMART BRCT_7 662 739 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02930 Phac-Chr1 37998887 38003966 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02930 - K20780 gmx:102667761 982.63