Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02917 ATGCTGAGCGTGCTGCGCGTGCACCTCCCTTCTGATATTCCCATTGTAGGCTGTGAGCTCACGCCTTACGTGCTCCTACGCAGACCTGACAAGACCGTTACCACCGACGATGTCCCCGAAGCATCCCCGTTAGACGGCCATTTCTTGCTCTACAAGTGGTATCGAGTGCAGAGTGATAAAAAGGTTGCTGTTTGTAGTGTACATCCATCTGAGCAGGCTACACTGCAGTGCCTTGGTTGTCTAAAGGCTAAAATACCTGTTGCCAAAAGTTACCACTGCACTCCAAAGTGTTTTTCAGACGCATGGCAGCATCATCGTGTCTTACATGATCGTGCTGCAAGTTCAGGTAATGAAAATGGAAATGAGGAGGAAGAGTTATTTGGGCGATTTAATAATTCTGGATCTGGATCAATCAACACCTTATCTGCCTCTGCATCAAGTGCTAGCTTGACAAATGGGTCTGCACCTGTGTATCCAGCAGCCATTACACAACGAAGTGGTGGTGAAACTTGGTTTGAAGTTGGACGATCTAAGACATATACGCCAACAGCTGATGACATTGGCCATGTCCTTAAATTTGAGTGTGCTGTAGTTGATGCAGAGACTAAACTTACTGTAGGGCACGCTAGCACTCTACTAACTTCCCGTGTCATTCCTGCCCCCTCGCCTAGCCCACGCCGGCTAATACCTGTTGATGGGATGGGTCATTTGGATGCTGATGGGCGTATAACATCGTCAGGAACTTTTACTGTTCTATCATACAACATATTGTCTGATTCATATGCGTCAAGTGATCTATACAATTACTGCCCTTCATGGGCTCTTTCTTGGCTGTATCGCAGGCAAAATTTGTTACGAGAAATAGTCGTTTACCGTGCTGATATTATTTGTCTTCAGGAGGTTCAAAGTGATCATTATGAAGAATTTTTTTCTCCTGAACTGGACAAACATGGCTATTATGGTCTTTACAAAAGGAAAACAAATGAGGTATATAGTGGCAACATGAATACAATTGATGGGTGTGCAACATTCTTCCGCAGAGACAGATTTTCACATGTGAAAAAATATGAGGTTGAATTTAATAAGGCTGCACAGTCTTTAACAGATGCTGTGATTCCAACCACTCAGAAGAAAACGGCCTTGAATAGACTGGTTAAGGATAATGTTGCATTAATAGTTGTTTTAGAAGCAAAAGTTAACAATCAGCCTGTTGATAATCCTGGGAAGAGACAGCTTCTTTGTGTGGCAAATACACATGTAAATGTTCATCAAGATTTAAAGGATGTCAAACTCTGGCAGGTGCACACTCTTTTGAAAGGACTGGAGAAAATTGCTGCTAGTGCAGACATTCCAATGTTGGTTTGTGGGGACTTTAATTCAGTTCCAGGAAGTGCTCCTCATGCACTTCTTGCAATGGGAAAGGTAGATCCATCCCATCCTGATTTAGCAGTTGATCCACTTAATATATTGCGTCCTCACAGCAAGTTGGTTCACCAGTTGCCACTGGTCAGTGCTTATTCTTCCTTTGCAAGAACAGCTGGTCTTGGATTTGAGCAGCATAAACGGAGACTAGACAATGCAACAAATGAACCTTTATTCACTAATGTAACCAGAGATTTTATTGGCTCTCTAGATTACATATTTTACACAGCGGATTCATTGGTTGTGGAGTCATTGTTGGAGCTATTGGACGAGGAGAGTTTGCGGAAAGACACAGCGCTTCCTTCTCCTGAATGGTCCTCTGATCATATAGCTCTGTTAGCCGAGTTTCGCTGCTGCAAGAATAGATCGAGGCGATGA 1800 0.4339 MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKTVTTDDVPEASPLDGHFLLYKWYRVQSDKKVAVCSVHPSEQATLQCLGCLKAKIPVAKSYHCTPKCFSDAWQHHRVLHDRAASSGNENGNEEEELFGRFNNSGSGSINTLSASASSASLTNGSAPVYPAAITQRSGGETWFEVGRSKTYTPTADDIGHVLKFECAVVDAETKLTVGHASTLLTSRVIPAPSPSPRRLIPVDGMGHLDADGRITSSGTFTVLSYNILSDSYASSDLYNYCPSWALSWLYRRQNLLREIVVYRADIICLQEVQSDHYEEFFSPELDKHGYYGLYKRKTNEVYSGNMNTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAVIPTTQKKTALNRLVKDNVALIVVLEAKVNNQPVDNPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLVHQLPLVSAYSSFARTAGLGFEQHKRRLDNATNEPLFTNVTRDFIGSLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNRSRR* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02917 599 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 160 592 - -
Phac1g02917 599 FunFam Carbon catabolite repressor protein 4 1 218 597 - -
Phac1g02917 599 Gene3D Endonuclease/exonuclease/phosphatase 219 598 IPR036691 -
Phac1g02917 599 SUPERFAMILY DNase I-like 245 593 IPR036691 -
Phac1g02917 599 CDD Deadenylase_CCR4 251 592 - -
Phac1g02917 599 Pfam Endonuclease/Exonuclease/phosphatase family 252 583 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02917 Phac-Chr1 37925825 37932768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02917 277 475 EF-hand Containing Proteins AT5G54130 24.645 9.96e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02917 K12603 - gmx:100808935 1113.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02917 1 37925825 37932768 Phac1g02917 1 37925825 37932768 ECH