Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02905 ATGTCGCTAGCCACTAGAATGGACAAACAGAAGGGAACTGGTATTGATTTTGAGACATTCACGTGGAAGATTGAAAACTTCTCAAAACAGAACAAGAAGAAACTACAATCCAAGGCCTTCCGAATTCAAGGTTATAAATGGCGTATTCGTTTGTATCCATTAATGAAAAATGTTGATCATTTCTCGTTATATCTGATGGTTGCGGATTCTTTACCACCGTACGGATGGAGCAGAGATGCATATTTTAAGTTGTCTCTGCTTAATCAATTGGATGGCGATAAGTCAGTTGTAAAGGAGACTCGGCAGAAGTTCAATGGTGGATATCGTAGCTGGGGTTCATTTTTCGTGAACCTAAGTGTCTTCCATGACTTAAAGCAAGGCTATCTTGTGAATGACACATGCATCATTGAAGCTCATCTCTGTGTCTCGGATCTTAGTACTGTTGAAGCTAACAATTTGAACGCAGTCACTCCAATTAGCTACGCTATGTTGGGTGATCAAGCAAGAAGAAATTCAGAATCCACACAGAAGGAAGATGATAAAGAAACAGAAACAGAAACATCAGATGAGAGTGAGACACTTAGTTGGAGCACCTGTGGGTCTAGTCAAACAGAAGGGGAAGTTCAAAGTTCAGATTTGACACTAAAAGACCTTCTAGATTTGGGGAGTTTAGGGAAAGAAGAAGCAGCTTTTGTTCCACTGTTGGAAGAGGCATGCATATGGCATCCTTCCCTGATAAGGAGCCAGAGGAAAAGTTCTAGATGGTTCAGACTATGGGCATTCACATCATTAGGTCAAGTTCTACATTTACTCAAGACAAGTAAAGCGAAGGATATGAATGAAGATGCATGCAATCGCCTTCATGGTTTGTGGGAGGAACTTGTTAAACATTCTGGATTTCAGTTGTCTTGGTTGGAGCCTTATGTTGAATCTGCATTGGGTATGAAAGCTCATTTGGAAAAAACAGAAGAGGTGAACAAACTGAAAGACAGTGTGGTTGCTTTGGAGATCAAAATGAAGAAGCTGAGGGGAGAATTGGCAGCTGCAGAAGCTGAATTTGAGGTAACAAGGAGGGCCTTGGTTGAGGCCAAAAAAGGTTTCATAGAGTTGGATTTTAATGCTGAATTAGGTTATGCTATGTTTTAG 1146 0.4066 MSLATRMDKQKGTGIDFETFTWKIENFSKQNKKKLQSKAFRIQGYKWRIRLYPLMKNVDHFSLYLMVADSLPPYGWSRDAYFKLSLLNQLDGDKSVVKETRQKFNGGYRSWGSFFVNLSVFHDLKQGYLVNDTCIIEAHLCVSDLSTVEANNLNAVTPISYAMLGDQARRNSESTQKEDDKETETETSDESETLSWSTCGSSQTEGEVQSSDLTLKDLLDLGSLGKEEAAFVPLLEEACIWHPSLIRSQRKSSRWFRLWAFTSLGQVLHLLKTSKAKDMNEDACNRLHGLWEELVKHSGFQLSWLEPYVESALGMKAHLEKTEEVNKLKDSVVALEIKMKKLRGELAAAEAEFEVTRRALVEAKKGFIELDFNAELGYAMF* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02905 381 CDD MATH 19 140 IPR002083 GO:0005515
Phac1g02905 381 SMART math_3 19 121 IPR002083 GO:0005515
Phac1g02905 381 Coils Coil 325 359 - -
Phac1g02905 381 Pfam MATH domain 24 140 IPR002083 GO:0005515
Phac1g02905 381 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 17 353 - -
Phac1g02905 381 MobiDBLite consensus disorder prediction 167 205 - -
Phac1g02905 381 ProSiteProfiles MATH/TRAF domain profile. 17 140 IPR002083 GO:0005515
Phac1g02905 381 SUPERFAMILY TRAF domain-like 19 143 - -
Phac1g02905 381 MobiDBLite consensus disorder prediction 190 205 - -
Phac1g02905 381 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 17 160 IPR008974 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02905 Phac-Chr1 37832995 37835097 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02905 - - gmx:102664376 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02905 1 37832995 37835097 Phac1g02905 1 37832995 37835097 ECH
Phac1g02905 1 37832995 37835097 Phac8g02797 8 36947360 36959707 ECH