Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02871 ATGGATTCCCCTTCCATCTATGGCGTCTCCCACATCTTCACCCTCTTCATCGTCTTCCTTCTACCATTCCCTTCCCTCTCCGCATTCCCTCACAACTCTTCAACCACCCCTCAGGTTAACTCCAACTCCATCCTCGTCGCGCTTCTCGATTCCCATTACACCGAACTAGCCGAGCTCGTCGACAAAGCACTTCTTCTCCAGCAACTTGAAGACGCCGTCGGCAACCACAACATCACTGTCTTCGCGCCGCGAAACCAGGCCCTCGAACGCGACCTCGACCCCGAGTTCAAGCGCTTCCTCCTTGAGCCCCGCAATCTCCGCTCCCTTCAGACACTCCTAATGTCCCACATTCTCCCCACGCGAATCTCCTCTCGCCACTGGCCCGCCGCCGACCGCCGCCACGCCACGCTCGGAAACCACCACCACTTGCATTTGGCCACCAAGCCCTCCGGTCAGATGACTGTCGACGCCGCCGAGATCCTCCGCGCTGACGACATCGTCCGTCCCGACGGCGTCATCCACGGCATTGAGCGTCTCATAGTTCCCCGATCCGTCCAGGAGGACTTCAACCGCCGCCGAAACCTCGCCGCTATCTCCGCCGTCATCCCGGAGGGCGCGCCGGAAGTCGATCCCCGCACCCACCGCCTCAAGAAGTCCGCCCCCGTCCCCGCCGGCGCCCCACCCGTGCTTCCAATCTACGACGCCATGGCGCCGGGACCGTCCATCGCGCCGGCACCTGCTCCGGGACCCGGAGGTGCGAAGCACCACTTCAACGGCGAGCGGCAGGTGAAGGACTTCATCCACACGCTCTTGCATTACGGAGGGTACAACGAAATGGCCGATATTCTCGTTAACCTAACGTCTCTGGCCACCGAAATGGGAAGGCTCGTTTCGGAGGGTTATGTTCTGACCGTTTTGGCCCCAAACGACGAAGCCATGGCGAAGTTAACGACGGATCAGTTGAGCGAACCGGGCGCGCCGGAGCAGATTATGTACTATCACATTATTCCCGAGTACCAAACCGAAGAGAGTATGTACAATGCCGTTAGAAGGTTCGGTAAGGTCAGTTACGATACGCTGCGCTTACCCCATAAGGTTCTCGCTCAGGAGTCTGACGGTTCCGTTAAATTCGGGCACGGCGATTCCTCCGCTTACTTGTTCGATCCTGATATTCACACCGATGGAAGGATCTCCGTCCAGGGAATTGACGGCGTTCTTTTCCCCCCGGAGGAAGTGGAAGAACGCACCCGCCGCACCACTCCACTTGTCAAGGTTGCCGCTAAACCAAGGAGAGCTAGCAATTGGGTTGGGAAGGGAAGGGAAGGGGCTTGTGTTTATATTTATGGCATTAAGCTTTCTGGAAAGGGCACCACGTGTGAAACCATTGTTGTGTTTTACCTTTTAAGAAGGGAGTTTCAGTGGATCGCTTGTACACTGAGTCTTCTCTTTTTCTATTGA 1458 0.572 MDSPSIYGVSHIFTLFIVFLLPFPSLSAFPHNSSTTPQVNSNSILVALLDSHYTELAELVDKALLLQQLEDAVGNHNITVFAPRNQALERDLDPEFKRFLLEPRNLRSLQTLLMSHILPTRISSRHWPAADRRHATLGNHHHLHLATKPSGQMTVDAAEILRADDIVRPDGVIHGIERLIVPRSVQEDFNRRRNLAAISAVIPEGAPEVDPRTHRLKKSAPVPAGAPPVLPIYDAMAPGPSIAPAPAPGPGGAKHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNAVRRFGKVSYDTLRLPHKVLAQESDGSVKFGHGDSSAYLFDPDIHTDGRISVQGIDGVLFPPEEVEERTRRTTPLVKVAAKPRRASNWVGKGREGACVYIYGIKLSGKGTTCETIVVFYLLRREFQWIACTLSLLFFY* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02871 485 ProSiteProfiles FAS1/BIgH3 domain profile. 40 180 IPR000782 -
Phac1g02871 485 Pfam Fasciclin domain 298 408 IPR000782 -
Phac1g02871 485 Pfam Fasciclin domain 52 182 IPR000782 -
Phac1g02871 485 SUPERFAMILY FAS1 domain 242 410 IPR036378 -
Phac1g02871 485 FunFam Fasciclin-like arabinogalactan protein 16 258 409 - -
Phac1g02871 485 Gene3D FAS1 domain 44 182 IPR036378 -
Phac1g02871 485 Gene3D FAS1 domain 282 409 IPR036378 -
Phac1g02871 485 SMART fasc_3 304 409 IPR000782 -
Phac1g02871 485 SMART fasc_3 79 183 IPR000782 -
Phac1g02871 485 ProSiteProfiles FAS1/BIgH3 domain profile. 263 406 IPR000782 -
Phac1g02871 485 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 3 433 IPR044654 -
Phac1g02871 485 SUPERFAMILY FAS1 domain 31 183 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02871 Phac-Chr1 37687431 37689665 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02871 - - gmx:100818575 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02871 1 37687431 37689665 Phac1g02871 1 37687431 37689665 ECH