Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02806 ATGGCCCTGTCCCGTGGATCAATCCTCACTCGATCAGTGTGGTCCTCCAATCTGGAATCGGAGTTCGACTTAATCCGATCCGTCGTCGACTCCTTCCCTCTCATCTCGATGGACACCGAGTTCCCCGGCGTCGTCGTGCGCCCCGACACCTGCGACCCTTCCTTCCGCCACCGCCAACCAGCCGCGCACTACGCCGTGCTTAAAGCCAACGTCGACCGCCTCCACCTGATCCAGATCGGTCTTACTCTCTCCGATCAAGTGGGAAACCTTCCCACACTCGGCACCTCCAACGCCTTTGTCTGGGAGTTCAACTTCCGAGACTTCGACGTATCGCGTGACGCCCATGCCCACGACTCCGTTGAGTTGCTACGGCGTCAGGGCATCGATTTTGAGAAGAATCGGGAGTTTGGGATCGACTCTGTACGGTTCGCCGAGCTCATGATGTCTTCTGGTCTGGTCTGCGATGACGCGGTTAGCTGGGTGACGTTTCACAGTGCCTATGATTTCGGATACCTGGTGAAATTGTTGACCCAGCGCACTCTACCGGAGGAATTGGCAGAATTTCTCCGTCTGGTGAGGGTGTTTTTCGGTGAGAGAGTCTTTGATGTGAAGCACTTGATGAGGTTCTGCTCAAATCTTCATGGAGGTTTGGATCGAGTATGCCAGTCGCTGAATGTGGAACGAGTTGTAGGGAAAAGCCACCAGGCCGGTTCTGATAGCTTGCTCACTCTGCACGCTTTTCAGAATATAAGAGAGGTTTATTTTGGCAAGGCTGATGGACTTGTTCAGTATGCTGGTGTCTTGTATGGTTTGGAGGTTTTCTAA 825 0.5358 MALSRGSILTRSVWSSNLESEFDLIRSVVDSFPLISMDTEFPGVVVRPDTCDPSFRHRQPAAHYAVLKANVDRLHLIQIGLTLSDQVGNLPTLGTSNAFVWEFNFRDFDVSRDAHAHDSVELLRRQGIDFEKNREFGIDSVRFAELMMSSGLVCDDAVSWVTFHSAYDFGYLVKLLTQRTLPEELAEFLRLVRVFFGERVFDVKHLMRFCSNLHGGLDRVCQSLNVERVVGKSHQAGSDSLLTLHAFQNIREVYFGKADGLVQYAGVLYGLEVF* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02806 274 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10 272 IPR039637 GO:0004535|GO:0030014
Phac1g02806 274 Gene3D - 2 273 IPR036397 GO:0003676
Phac1g02806 274 Pfam CAF1 family ribonuclease 13 138 IPR006941 -
Phac1g02806 274 SUPERFAMILY Ribonuclease H-like 5 272 IPR012337 -
Phac1g02806 274 FunFam Putative CCR4-associated factor 1 7 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02806 Phac-Chr1 37156478 37157302 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02806 K12581 - gmx:100805583 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02806 1 37156478 37157302 Phac1g02806 1 37156478 37157302 ECH