Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02667 ATGGACGCACCTCGTAAGCAGCAGGTGTCGTTGAGAGGAGCAAGTGCGAAGGAGATAACGCGAGACGCCCTTCTTCAGAAGGTCTCTCAGGAAAGAGAACTTCGCAATTATGCAAAACGAGCTGCTGCTGCTGCTCTCTTCATTCAGAGAGTATGGAGGCGCTTCAAGGTCACAAAGACAGTTTCTCTGCAACTTCAGCAAGAATGGGAGATGGCAGTGAATCATTATACTGGTCTGATGACAGCAAATTGGATTTCAAACAATTTGTTGAGACCATTTCTGTTCTTCATTACCCGTATCTCCACTCAACATGAAAAGGTCCACTGCAAGAGAATAGATTCTATGAAACTGTGCTTTACAATTGTACTGGAAAGCCTGAAATCTTCTGATTCAAAGCTGAACTTTTGCTTTCTGGCAATTGGTACAACTGAAGAAAGAAGAATGTGGAGATACCAGGCACGCAAGCTGACTTCTCTTAGTTTTCTTATTCTTTCAGAGTTCAGTGAATGTCCTTCGGGGGCCCAAGATATTACTATTGTTACATCTCTATCTATGCGTGTTCTTGTAATGTTAACTGATCTGAAAGGATGGAAAGGAATTACAAATAACAACCACTTTGATGCAGATTTAGCAGTGAAAGATTTAATTCAGTTCATGGGAGGTGATAAAAGTGGTTGTTATGTGTCTATTGGCAGATATATTAGTGCATTAGAAAATCATTCTTCTCAGTCAAAGACCATCACCCATGCAGATGAAATTTTTTTCGTTACTGCAAGTGCAATAACTTTAGCTGTACGGCCTTTTTATCTGACAAACTATGATGCAGAAGCGCCTCATATGCTGGATTTCAACAATGCTGCTGAGCAGTATATTGTTTCTCTGCTGACTATACCTTGGCTAGTGCAACGTCTCCCCCTTGTTCTTCTACCAGCCTTAAAGCACAAATCTATTTTGTTTCCATGCTTCCAGACTCTATTGATTTTGAAAGAGAAAGTTTTGATGGAGATGTCAGGGTTCATCAAATCAGAGATTCCTGTCTCTTTCAAGGCTATTCCACCAGTTGGTTGGGCCCTCGCTAACATCATCTGCTTAGCAACAGTGAATGAGAATGAATCCTTCAATCAAGGTTTAGACCATGGATTGTATGTCCATGTTGTTATTACTCTATCAGAGGCTCTGCTGGCTTGTCTTGATAATATTGGATGGGTCAGAAAGAAAAAGAAAGCCCTTCAAACTGATGTTGAAAATTCAACACAGCCAATTGATGCAGTTCAGCACGAGGGTGAAGCAACCAATGAATCCTTAATATTGTCATACATGGATCAATTTAGGCCTGTTTGTCAGCAGTGGCATCTCAAAATTCTTTTGGCATCAATTGATAGAGATTCCAATAACAAGGCTGCGACTGTGCTCTCAAGTAGCCTGGAATGTCTGGGGAACCTTGAATTGTGTGATATTGCACTTTTTTATTCTAACTTACTTAGAATATTTTCAGTCTTGAGTCCAATTCGTGGCTCATTATCAGTTCTCAACATGCTATCATTTACTCCTGGATTTCTTGTGAGATTGTGGAGTGTACTGGAGGGTTCCTTTTTTTCTGGAGACAAACATAATTCTGATAATTACACAAGTGAAAACAGCAAACATAAAGTCTTTGAGAAGATGCAAAAACAAGTCAGTAAAGATGGACCTAATAAGTGGGTCAATGTACTTCATAGATTTACGGGTAAGTCACAAGCAGCAACAGATTGCACTAATTTTATTGACAATCACACTGAGTCTAGCAGAGTGAATGAGGATTCATCAGACATATGGGACATAGAACCTATGAGGAATGGGCCACAAGGCATTCCAAAGGATATGTTTTCTATGCTTCATCTTTTCTGTGCGACCTATTCTCACCTGCTTTTAGTTCTTGACGACATAGAGTTCTATGAGAAACAGGTTCCATTCCAAATAGAGCAGCAAAGAAGAATAGCATCTATGCTCAATACCTTGGTTTATAATGGCTTGTCCCATGTTGGTGGTCATCATAATAAGCCCCTAATGGACTGTGCTGTCAGATGCTTACATTTACTGTATGAAAGGGATTGCAGACACCCATTTTGTCCTCCTGCTTTGTGGCTTTCTCCTGCTAGAAAAAGCCGGCCACCAATTGCTGTTGCTGCCAGAACTCATGAAGCTTTAGCAGCCAACTTGAGATATGATGATTCATCTGCTTCGCTGAGTGCTGGTTCTGTTGTCACTATTGTTCCTCACGTTTTCCCTTTTGAGGAGAGAGTTGAGATGTTTCGTGAATTCATCAAGATGGATAAAGCATCTCGAAAAATGGCTGGTGAAATTTCTGAACCTGGTTCACGAGCCATTGAGATTGTAGTACGCCGGGGTCATATTGTTGAAGATGGATTTCGGCAATTAAATTCCCTTGGGTCAAGGTTGAAGTCATCCATCCATGTATCATTTGTTAGTGAATGCGGTCTTCTTGAGGCTGGCCTGGACTATGGTGGATTATCTAAAGAGTTTCTAACTGACTTGTCAAAAGCAGCATTTGCTCCTGAATATGGTCTCTTTTCCCAAACCTCAACTTCAGACAGGCTTCTAATTCCAACTGCATCTGCCAGATATTTGGAGAATGGTCTTCAGATGATTGAATTCCTTGGAAGAGTAGTCGGTAAAGCTCTATATGAAGGGATATTACTCGATTACTCTTTCTCCCATGTTTTTGTACAAAAGCTTTTGGGACGATATAGTTTTCTTGTTGAATTATCAACACTTGATCCAGAGTTATACAGGAATCTGATGTATGTCAAGTTACTGAAGAATCATTGGGCAAAAGGTATGTGGTTGAACTGA 2853 0.4045 MDAPRKQQVSLRGASAKEITRDALLQKVSQERELRNYAKRAAAAALFIQRVWRRFKVTKTVSLQLQQEWEMAVNHYTGLMTANWISNNLLRPFLFFITRISTQHEKVHCKRIDSMKLCFTIVLESLKSSDSKLNFCFLAIGTTEERRMWRYQARKLTSLSFLILSEFSECPSGAQDITIVTSLSMRVLVMLTDLKGWKGITNNNHFDADLAVKDLIQFMGGDKSGCYVSIGRYISALENHSSQSKTITHADEIFFVTASAITLAVRPFYLTNYDAEAPHMLDFNNAAEQYIVSLLTIPWLVQRLPLVLLPALKHKSILFPCFQTLLILKEKVLMEMSGFIKSEIPVSFKAIPPVGWALANIICLATVNENESFNQGLDHGLYVHVVITLSEALLACLDNIGWVRKKKKALQTDVENSTQPIDAVQHEGEATNESLILSYMDQFRPVCQQWHLKILLASIDRDSNNKAATVLSSSLECLGNLELCDIALFYSNLLRIFSVLSPIRGSLSVLNMLSFTPGFLVRLWSVLEGSFFSGDKHNSDNYTSENSKHKVFEKMQKQVSKDGPNKWVNVLHRFTGKSQAATDCTNFIDNHTESSRVNEDSSDIWDIEPMRNGPQGIPKDMFSMLHLFCATYSHLLLVLDDIEFYEKQVPFQIEQQRRIASMLNTLVYNGLSHVGGHHNKPLMDCAVRCLHLLYERDCRHPFCPPALWLSPARKSRPPIAVAARTHEALAANLRYDDSSASLSAGSVVTIVPHVFPFEERVEMFREFIKMDKASRKMAGEISEPGSRAIEIVVRRGHIVEDGFRQLNSLGSRLKSSIHVSFVSECGLLEAGLDYGGLSKEFLTDLSKAAFAPEYGLFSQTSTSDRLLIPTASARYLENGLQMIEFLGRVVGKALYEGILLDYSFSHVFVQKLLGRYSFLVELSTLDPELYRNLMYVKLLKNHWAKGMWLN* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02667 950 Pfam HECT-domain (ubiquitin-transferase) 844 941 IPR000569 GO:0004842
Phac1g02667 950 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 6 938 IPR044611 GO:0000209|GO:0061630
Phac1g02667 950 Gene3D Hect, E3 ligase catalytic domains 743 944 - -
Phac1g02667 950 SUPERFAMILY Hect, E3 ligase catalytic domain 789 938 IPR035983 GO:0004842
Phac1g02667 950 ProSiteProfiles HECT domain profile. 813 936 IPR000569 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02667 Phac-Chr1 36040988 36051936 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02667 K10588 - gmx:100527169 1642.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02667 1 36040988 36051936 Phac1g02667 1 36040988 36051936 ECH