Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02613 ATGGTTTGGAGCCACTCTCCGAACTCGCTTAGCCTCTCCTCTCTCGTAATGGCGTCTCCGTTTGAATTCGCGGACCACGACGAAAACCTAATCGCAACGCGACCACTCATCCGAGGACCCGCACATTACGTATTCACCGACGATGAAGACACCGACGACGAAGGCGAAGACGAAGACGAAGAAGACGAAGAGTACGTTCCCGGTGTGGCCTCCCCTAGGGCTTCGCACGACACTCCTCGTATCGTTTCATCCAATAACTTAATCGTTATCCCCGACGAATCACAGGATTGCGTTGAAGAGGAAGGAAATAAACGCCGCAGGTACGAAGGAGGCGAGACTTCCTGTTCCTTCGCGATTGGGAGCAGCAACGGTAGCCAAGGAAACGACCACACCGACATTGATGGTCTCTTTTGCCCTATTTGCATGGATGTTTGGACCAATAACGGCGAACATCATATCTGTTGTCTTCCTTGTGGACACATATATGGCATGTCTTGCATCAAAAGATGGCTTAAACAGCGCAAAAATTCCAGCAAGTGTCCACAATGTAATAGGAAATGTACGTTGAAGGACGTGAGGAAACTCTTTGCTTCCCGAGTAGTTGCCGTCGAGGAAGAGTCTCAGAAGAGAATTCAGTCACTTGAGGCCAAATGTGCTGCCCTTGAAAGTAAGGCCAGTGATTGGCGCAAGAAAGAAGATGGATGGAAGTATCGAGAAGCCGCCTTGCATGTTGAAGTTCAGAGTCTTACAGAGAGAAACACTTATTTGGAGCAGCTGCTACTAGGTATGCAGAGCAGGCAATATGCATCGATAAGTGGCAATGGAAACTCTCAGTGGAGAAGTGAATCTGAGCACAACATCGGCCCAAAGTACTGTGGAAAGGGATCCATTTGTAATTTTGAATTGCAGAAAGAGTTTCATCTGGATGGTGGGCGCATTTTTGATATGGACATCTCTAATCAAATTTTATTAATTGCACAAAAGCCAAAGGAAGTAGGTGGAATGCACTTGCTAACTAAAATGAGCTTGTTGTCTCCATTTGAGACGCAAGATATCTTGCTGCCTTCTGATACATTTGGTGTTAAAGACTTGCATATTTCTCCTTCTAATAGTAGTCTGGCTCTCTTTTCTTCATTAGGAAAGAAACTATCAGTGCTCAGCTTGGACAGTGGCAATCTTGTTATCAATTATGATCTACAGGATCCTGCATGGTCTTGTTCGTGGGATCTCAACAATTCGCATAACATATATGCTGGGCTACAGAATGGTTCTGTCTTAGTGTTTGACATGCGTCAAACTGTAGGCCCCATGAAATCTTTAGTTGGTTTGACTAACAACCCTGTGCATACTGTCAATTCTCTTGCACAAACTTCAAGTCTTTCTTCTGGTGTTAAAACCATCCTATCGGCATCTGCCTTTGGCCTTTGTCAATGGAACATTGATTCTGAAGAACGGCCGCTTGTGGTTCCTGAAACTGACAATCAAGGAGTCTGCATATCGCTTGCCTATTGCCCTAGCAGTGATGACATTGTTGCTTCTTACAGACCGATATTCAGTATGTCCATGGATGTGCCTCTATCTCAACCATTGGCCACTCCTCTTAGTGCTGGACAAGGAGTACAGGGCACTCATGTCTTGTTCAATAGAATGGGTGGTCATCATTTCCAAAAGGTGGGTTCCTCATATGCCAATGTGAGTAAAATTCGACTACCAAAATGTGTAATTATGGACATAGAGAATCAGAGCAGATTGTTTGCATCTTGGGATGAAGTTACATGTGATTTGCTCTTGCATGAGTTGCCATCTTTTAGAGTTCTTCAGCAATTCAAAATGCCAGCTCAGGCCCGTGATCTTAGGTACTCACCTAGCCACGGCATACTTGGTTGTTTAAGTGAGAACACGTTGCAGCTTTTCTATTCCAAACACTCGTCGGTAAGGTAA 1941 0.4493 MVWSHSPNSLSLSSLVMASPFEFADHDENLIATRPLIRGPAHYVFTDDEDTDDEGEDEDEEDEEYVPGVASPRASHDTPRIVSSNNLIVIPDESQDCVEEEGNKRRRYEGGETSCSFAIGSSNGSQGNDHTDIDGLFCPICMDVWTNNGEHHICCLPCGHIYGMSCIKRWLKQRKNSSKCPQCNRKCTLKDVRKLFASRVVAVEEESQKRIQSLEAKCAALESKASDWRKKEDGWKYREAALHVEVQSLTERNTYLEQLLLGMQSRQYASISGNGNSQWRSESEHNIGPKYCGKGSICNFELQKEFHLDGGRIFDMDISNQILLIAQKPKEVGGMHLLTKMSLLSPFETQDILLPSDTFGVKDLHISPSNSSLALFSSLGKKLSVLSLDSGNLVINYDLQDPAWSCSWDLNNSHNIYAGLQNGSVLVFDMRQTVGPMKSLVGLTNNPVHTVNSLAQTSSLSSGVKTILSASAFGLCQWNIDSEERPLVVPETDNQGVCISLAYCPSSDDIVASYRPIFSMSMDVPLSQPLATPLSAGQGVQGTHVLFNRMGGHHFQKVGSSYANVSKIRLPKCVIMDIENQSRLFASWDEVTCDLLLHELPSFRVLQQFKMPAQARDLRYSPSHGILGCLSENTLQLFYSKHSSVR* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02613 646 ProSiteProfiles Zinc finger RING-type profile. 138 184 IPR001841 -
Phac1g02613 646 SUPERFAMILY WD40 repeat-like 299 514 IPR036322 GO:0005515
Phac1g02613 646 CDD mRING-C3HGC3_RFWD3 134 196 - -
Phac1g02613 646 MobiDBLite consensus disorder prediction 47 65 - -
Phac1g02613 646 SUPERFAMILY RING/U-box 131 190 - -
Phac1g02613 646 PANTHER RFWD3 PROTEIN 46 639 IPR037381 GO:0004842|GO:0005634|GO:0016567|GO:0036297
Phac1g02613 646 Coils Coil 204 231 - -
Phac1g02613 646 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 197 IPR013083 -
Phac1g02613 646 Gene3D - 198 522 IPR015943 GO:0005515
Phac1g02613 646 MobiDBLite consensus disorder prediction 42 77 - -
Phac1g02613 646 Pfam Ring finger domain 138 184 IPR001841 -
Phac1g02613 646 SMART ring_2 138 183 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02613 Phac-Chr1 35530563 35536076 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02613 K15691 - gmx:100818898 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02613 1 35530563 35536076 Phac1g02613 1 35530563 35536076 ECH