Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02546 ATGGGTTCACTAGAAAGATCAAAAAAGAAAGTTCTTCTATGGAAGAAGGCCATGCTCCATTTTTCCCTTTGTTTTGTGATGGGATTTTTCACAGGCTTAGCTCCAACAGGTAAATCTTCTCTCTTTTCCACCAAAGTTGCTGTTTCAAATAGGACACAGTTTGCTCCACAACCTGTTGAAATGTCACACCTCACAACAAATGTCAATAAAAGTTGGATAGCTCCTCCTCCAGTCACCATGCCCATGAACCCTAGAATCCTTGAAACTGAAAAGAAAAAAGCAACACCCAAGTTAAAAGAACAGCCCCAGTTGAAGCCGAGAAGACTCATAATCATTGTGACTCCAACAAGCACAAAACTACCCCACCAAGCAGTGTTTTTGAGAAGATTGGCAACTACTATAAAGCTTGTTCCTCAACCATTGCTGTGGATTGTTGTGGAAGCAAAAACAAATTCCACAGAACTGCCTGAGATACTGAGGAAAACTGGCATCATGTATAGGCATGTAGTTTTCAAGGAAAACTTCACTGAATTAGAAGCTGAACTGAATCACCAGAGAAATCTCGCACTCAAGCACATTGAGCACCACAGACTCAACGGCATTGTACACTTTGCTGGCCTTTCTAATGTCTATGATCTCCAATTCTTCCATCAGCTTAGGGATATTGAGGTGTTTGGAACATGGCCAACTGCATTGTTAGCTGCACATAGGAAGAAAGTGAAAATCGAAGGACCTGTTTGCGATTCATCACAAGTGATTGGTTGGCATCTAAGGAATATGAACAATGAAACTGATACAATCACTCCCCCAATTCATATTTCAAGTTTTGCATTTAATAGTTCCATCCTTTGGGACCCTGAGAGATGGGGTCGCACTTCCTCTGTTCAAGACACTTCTCAGAATTCAATCAAGTTCGTGAAGCAAGTAGTTCTAGAAGATGAGGCTAAGTTAAAGGGAATTCCACCAGAGGACTGCTCCAAAATCTTGCTCTGGCGTTTCAATTTTCGTGCCCAAACCACCTCAAATCACTAA 1032 0.4147 MGSLERSKKKVLLWKKAMLHFSLCFVMGFFTGLAPTGKSSLFSTKVAVSNRTQFAPQPVEMSHLTTNVNKSWIAPPPVTMPMNPRILETEKKKATPKLKEQPQLKPRRLIIIVTPTSTKLPHQAVFLRRLATTIKLVPQPLLWIVVEAKTNSTELPEILRKTGIMYRHVVFKENFTELEAELNHQRNLALKHIEHHRLNGIVHFAGLSNVYDLQFFHQLRDIEVFGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSKILLWRFNFRAQTTSNH* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02546 343 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 109 343 IPR029044 -
Phac1g02546 343 FunFam Glycosyltransferases 108 343 - -
Phac1g02546 343 Pfam Glycosyltransferase family 43 130 334 IPR005027 GO:0015018|GO:0016020
Phac1g02546 343 CDD GlcAT-I 108 337 IPR005027 GO:0015018|GO:0016020
Phac1g02546 343 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 13 340 IPR005027 GO:0015018|GO:0016020
Phac1g02546 343 SUPERFAMILY Nucleotide-diphospho-sugar transferases 108 339 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02546 Phac-Chr1 34871145 34874054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02546 1 339 Glycosyltransferase AT2G37090 61.207 2.94e-151 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02546 K20869 - gmx:100785607 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02546 1 34871145 34874054 Phac1g02546 1 34871145 34874054 ECH