Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02521 ATGAGAGATTTCGTGATCCTTGGCTCTTCTGTGGCAACCCCTTTTCCTTCTTCTTCGTCTGCAGCACCCCATCGCTACCCCATCAAACCCTCTCTTCCAAAGCTCGGTCCTTTCTCTTCTTCTTGGAACATTTCATGCGCCCTCCAAGCCCCCCTCTCTCTCAGCGCAGATTCCAAGCTTGTTGAGGAATTCGAAGTGGTTGATGAAGATGCCATTGATTCTGGGGTCGATGCTGAGGTTCTGGCCAAGATGGTTCTGTTGGGAATCCAAGGGAATAGTGTTAGGAGTGTTGTTCACACTCTCAATAGAGTGCAGGATCACTCAGTTTCTCTGGCTTCTCATCTTAATGGCTCTTCCATCGATGCCATTGCGAAGGAGTGTTGCCGATTGGTCATGTGCGGCCACATTGAGGAGGCTATTGAACTCATGGAGGTTCTCACACGTTTCAAGATATCAATCAGGGGATTTGTTCAGCCGTCTGACGTAATTAAACGCTGTGTTCTTAGTCGGAATCCAATTTTAGCTGTTAGGTATGCATGTCTTCTTCCCCATGCACAGATATTGTTCTGCAATATAATATCAGAATTTGGCAAAAGGAGGGATTTGATTTCTGCTTTGAAAGCATATGAGCTGTCGAAGAAACACATGAATATTCCCAATATGTACATGTACCGGGCAATAATTGATGCTTGTGGTCTATGTCGTGATTACATGAAATCTAGGTACATATATGAGGATTTGCTTAATCAGAAGATTACTCCAAATATATACGTTTTCAACAGCCTCATGAATGTGAATGCCCATGATCTTAGCTACACATTAAATCTATATCAAAATATGCAGAATCTTGGTTTAAAACCAGATATGACATCTTATAACATCCTACTGAAAGCATGCTGTGTTGCTGGAAGAGTTGATCTGGCTCAAGACATTTATAGGGAACTTAAGCATTTGGAATCAGTGGAACAGCTAAAATTAGATGTCTTTACCTACAGCACAATTATAAAGGTCTTTGCAGATGCGAGGTTGTGGCAGATGGCTCTAACAATCAAGCAAGACATGCTTTCTGCTGGTGTTTCTCTCAATACTGTTGCATGGTCATCATTAATCAATGCCTGTGCACATGCAGGGCTTGTAGAGCAGGCAATTCAGTTATTTGAAGAAATGCTTTTGGCTGGCTGCGAGCCTAATACTCAGTGTTTCAACATCATTTTAAATGCATGTGTTGAAGCTTGCCAATATGACAGGGCTTTTCGCTTTTTCCATTCTTGGAAGGGAAAAAAGATGTTAGGGTCATTTGGTGAAGGCTGCAACAACAATACAGGGCAGGAACTTGTGCATAATGTTACTACTATACCAAATGGCATTTCTAATTCACACATCTTGAGTTTTGCTGAGAGGTTCCCTTTCACACCAACTACAACAACATACAATATTTTACTCAAGGCCTGTGGTACTGATTATTACCATGCAAAAGCATTAATCAAAGAGATGGAAACAGTAGGCCTTTCCCCTAATCAAATTAGCTGGTCGATTTTGATAGATATATGTGGAGCATCAGCAAACGTGGAGGGTGCCATTGAGATTTTGAAAAACATGGGTGATGCTGGAATTAAACCTGATGTCATTGCATATACAACAGCCATTAAGGTTTGTGTTGAAAGTAAGAATTTTATGCAAGCGATAGCATTATATGAAGAAATGAAAAGCTACCATATACGTCCAAATTTGATAACATACAACACACTTCTGAAGGCACGCAGTAAGTATGGCTCCCTACATGAGGTGCAACAATGCCTGGCTATATACCAGGATATGCGAAAGGCAGGGTATAAACCCAATGACTGCTATCTGGAAGAATTGATCGAGGAATGGTGTGAAGGAGTAATACAAGATAACAGAGAGATTCAAGGAGAATTTTCTTCCAGCAATAAATCTGAATTAGAGAAATCCCAAAGTCTACTTCTTGAAAAAATTGCAGCTCACCTGCTAAAGAGGGTAGCTGACATCCTAGCAATTGATGTTCAAGGTCTAACAAAGGTTGAAGCTCGTTTGGTAGTTCTTGCAGTTCTTCGGATGATCAAAGAGAATTACAGTTTAGGACATTCAATAAATGATGATATCTTGATCGTCATAGGAGCCACTAAAGTAGACGAAAATCCGGCTAAACGCATATTAGAAGTGCAAGAAGCAATAATAAAACTTCTTAGAAATGAGTTGGGGCTGGAAGCTTTTCCTGCCAGAACCAGATTACCACTAAGTGACACACCAAAGTTAAAGCACCCCAACCTTGCAAATCTCAAAATAGAAGCACTACCAGCAGAGGATGCATTACCCACATCAATGGGGTTTCAGACCAGGAGACCTGGAATTCTAGTGAGGTTGAAGATCACCAGAAAATCATTATACAGTTGGTTGCACAGGAAGTAA 2430 0.4099 MRDFVILGSSVATPFPSSSSAAPHRYPIKPSLPKLGPFSSSWNISCALQAPLSLSADSKLVEEFEVVDEDAIDSGVDAEVLAKMVLLGIQGNSVRSVVHTLNRVQDHSVSLASHLNGSSIDAIAKECCRLVMCGHIEEAIELMEVLTRFKISIRGFVQPSDVIKRCVLSRNPILAVRYACLLPHAQILFCNIISEFGKRRDLISALKAYELSKKHMNIPNMYMYRAIIDACGLCRDYMKSRYIYEDLLNQKITPNIYVFNSLMNVNAHDLSYTLNLYQNMQNLGLKPDMTSYNILLKACCVAGRVDLAQDIYRELKHLESVEQLKLDVFTYSTIIKVFADARLWQMALTIKQDMLSAGVSLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILNACVEACQYDRAFRFFHSWKGKKMLGSFGEGCNNNTGQELVHNVTTIPNGISNSHILSFAERFPFTPTTTTYNILLKACGTDYYHAKALIKEMETVGLSPNQISWSILIDICGASANVEGAIEILKNMGDAGIKPDVIAYTTAIKVCVESKNFMQAIALYEEMKSYHIRPNLITYNTLLKARSKYGSLHEVQQCLAIYQDMRKAGYKPNDCYLEELIEEWCEGVIQDNREIQGEFSSSNKSELEKSQSLLLEKIAAHLLKRVADILAIDVQGLTKVEARLVVLAVLRMIKENYSLGHSINDDILIVIGATKVDENPAKRILEVQEAIIKLLRNELGLEAFPARTRLPLSDTPKLKHPNLANLKIEALPAEDALPTSMGFQTRRPGILVRLKITRKSLYSWLHRK* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02521 809 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 576 613 IPR002885 -
Phac1g02521 809 PANTHER OS03G0856100 PROTEIN 66 428 - -
Phac1g02521 809 Gene3D Tetratricopeptide repeat domain 321 451 IPR011990 GO:0005515
Phac1g02521 809 Gene3D Tetratricopeptide repeat domain 459 662 IPR011990 GO:0005515
Phac1g02521 809 Gene3D Tetratricopeptide repeat domain 186 320 IPR011990 GO:0005515
Phac1g02521 809 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 541 575 IPR002885 -
Phac1g02521 809 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 288 322 IPR002885 -
Phac1g02521 809 Pfam Pentatricopeptide repeat domain 529 586 IPR002885 -
Phac1g02521 809 Pfam PPR repeat family 362 409 IPR002885 -
Phac1g02521 809 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 327 361 IPR002885 -
Phac1g02521 809 Pfam PPR repeat 329 359 IPR002885 -
Phac1g02521 809 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 362 396 IPR002885 -
Phac1g02521 809 Pfam Pentacotripeptide-repeat region of PRORP 196 316 IPR033443 -
Phac1g02521 809 NCBIfam pentatricopeptide repeat 544 576 IPR002885 -
Phac1g02521 809 NCBIfam pentatricopeptide repeat 508 542 IPR002885 -
Phac1g02521 809 NCBIfam pentatricopeptide repeat 364 398 IPR002885 -
Phac1g02521 809 NCBIfam pentatricopeptide repeat 400 427 IPR002885 -
Phac1g02521 809 NCBIfam pentatricopeptide repeat 291 316 IPR002885 -
Phac1g02521 809 NCBIfam pentatricopeptide repeat 329 362 IPR002885 -
Phac1g02521 809 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 506 540 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02521 Phac-Chr1 34729361 34737792 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02521 223 636 Glycosyltransferase AT1G05670 20.882 1.57e-21 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02521 - - gmx:100794606 1350.88