Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02394 ATGGAGGAGGATGGTAGTGTCAAAGCAGGAAGTAGTCTCCGAGCAGGCAGTACTATGAGTAGTTTGAGGATTGGGAGTGTATCAGTTTGGAGGAACAGTGGTGTGGAAATCTTTGCCAACTCTTTCCACCAGGAAGATGATGAAGAGGCTCTGAAATGGGCTGCCATTCAGAAACTTCCTACGATGGCACGTTTGAGGACGGGCTTGCTGACTTCACCTGAAGGGGTTGCCAATGAGATTGATGTTCATCAACTGGGGTTGCAAGAAAGGAGAGGTTTGCTTGAGAGACTTGTCAGAGTTGTTGAAGAGGACAATGAGAAGTTCATGCTCAAGCTCAGGGACCGCATTGATAGAGTTGGAATTGCCATTCCTACAATAGAGGTTCGATTTGAGCACATGAGCGTTGGAGCAGAAGTTCATGTTGGTAGTAGAGCTCTGCCTACTTTCACTAACTACATGGTTAATAAAGTTGAGGGGGTATTGAACTTCCTGCATCTACTCCCAAGTAGAAAACAGCATATAAATATTCTCCAGGATGTTAGTGGAATAATAAGGCCTGCCAGAATGACATTGCTTTTGGGCCCTCCAAGTTCTGGGAAGACCACTCTCCTGTTGGCCTTGGCTGGAAGACTTGATTCAAAACTTAAGTTCAATGGAAAAGTGACTTATAATGGCCACGAGATGAATGAGTTTGTACCCCAACGAACTGCTGCTTATGTCAGTCAAAATGATCTTCATATTGGAGAAATGACAGTCAGAGAAACCATGGCCTTTTCAGCAAGAGTCCAAGGAGTTGGACCTAGTTATGATTTGCTAAGAGAGGTGTCCAGAAGAGAAAAAGAAGCAAATATTACACCTGATCATGATATAGATGTCTATATGAAGGCTGTCGCAACCGAAGGTCAGAAAGCAAATTTTATTACAGATTATATTCTAAGGATTCTTGGACTGGAGGTCTGTGCGGATACTGTTGTGGGAAATGAAATGTTAAGAGGGATATCTGGTGGACAAAGAAAACGTGTTACAACAGGGGAGATTCTGGTTGGACGACCTAAAGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGTTCAACAACTTTTCAAGTTGTGAATTCACTCAAGCACTATATCCATTCTCTCAAAGGAACTGCTGTTGTTTCACTCTTACAACCAGCACCAGAGACTTACAATCTTTTTGATGACATTATTTTACTCTCTGATGGGCAAATTGTGTATGAGGGTCCGCGTGAACATGTTCTTGAATTTTTCGCTTCTGTGGGTTTCAAATGTCCTGAGAGGAAAGGTGTTGCAGACTTTTTGCAAGAAGTGACATCAAGGAAAGATCAGGAGCAATATTGGGTACTCAGAGATCAGCCTTACAGATTCGTCACAACCAAAGAGTTTGTAGAGGCATTTCAATCATTTCATGTTGGGCGAAGCCTTGATAATGAACTTGAAACTCAATTTGACAAGTCTAAAAGCCACCCTGCAGCTTTGGCAACCCAAAAGTATGGATTAGGAAAGTGGGAACTGTTTAAGGCTTGCTTGTCAAGAGAATTTTTACTCATGAAGCGTAATTCATTTCTTCACATCTTCCAACTTTTCCAGCTTGCTACAGTGGGCTTTATTGCAATGACTGTTCTTTTTCGGACTGAGATTCACCGAGATTCAGTGACTGATGGTGGTATATATGTGGGGGCATTGTTCTATGGCCTTCTTGTAATTTTTTTGGATGGATTTGCTGATCTTACCGTGACAGTTTCTAAGCTTCCTGTTTTTTACAAGCAAAGGGACTTTCTCTTCTTCCCTTCATGGATATATGTTCTTCCTGGATGGATCCTGAAACTTCCCATGACTTTTGCGCTAGTGGGAATCTGGGTGTTCCTCACCTACTATGTTATTGGTTTTGATCCTTATGTTGGAAGATTATTCAGGCAATTCCTTCTTCTGTTATTTGTTAACCAGATGGCTTCATCCTTATTCCGGTTTATTGGAGCACTTGGTAGGGAACTGACAGTTGGTTTCACAATTGGGTCATTTTCATTGTCCATCCTCATTGCTATGAGTGGTTTCGTCTTGTCAAAAGACAATGTGAAAAAATGGTGGCTGTGGGGCTTTTGGTCATCACCTATGATGTATGGACAAAATGCCCTAGTAAATAATGAGTTCCTAGGGAAGAGATGGAGACATGTTCTACCCAACTCAACTACACCATTAGGAGTTGAAGTTCTGAAATCTCGCGGGTTCTTCACTCAGTCAAAGTGGTATTGGATTGGTGTTGGGGCACTGATTGGATATACGATAGTGTTCAATATCGCTTACATCCTCGCTCTCACTTACTTGAACCCATTAGTGCAGCATCAAGCTGTTAAATCAGAGCAATCTCAAAGCAATGCACAGGATGGTGGAAGCATTTCTACTAGGTCTTCATCCAGAAGAAAAGAAACTGAGAGAAGAGGAATGGTTCTTCCGTTTGAATCACATTCCATCACCTTTGAAGATGTAACATATTCTGTTGACATGCCACTGGAAATGAAGAATCAGGGTGTTGTTGAGGATAGGTTGGACCTTTTGAAGGGTGTCAGTGGCACTTTCAGACCAGGAGTTCTCACTGCTTTAATGGGTTCCACTGGTGCTGGAAAAACAACTCTGATGGATGTACTAGCTGGAAGAAAGACCGGGGGGTATATTGGTGGGAACATCACAATTTCTGGCTATCCAAAGAAGCAAGAAACCTTTGCAAGAATTTCTGGATACTGTGAACAAAATGATATCCACTCTCCCCATGTCACAGTATATGAATCTTTGCTCTATTCAGCATGGCTTCGATTATCAGCAGAAATCAATTCTGAAACCAGGAAGATGTTCATTGAGGAAGTGATTGAACTTGTGGAGCTGAACCCTCTAAAGCATTCAATTGTTGGATTGCCAGGTGTTAACGGTCTATCAACAGAGCAACGCAAAAGATTGACTATAGCTGTTGAGCTAGTGGCTAATCCCTCTATCATATTCATGGACGAGCCAACTTCTGGGCTAGATGCTAGAGCTGCTGCTATTGTCATAAGAGCAGTTAGAAACATAGTGGACACTGGAAGAACAGTTGTCTGCACAATCCATCAGCCTAGCATTGATATATTTGAATCTTTTGATGAGCTTTTTCTTATGAAACGAGGAGGGCAAGAGATATATGTGGGACCACTTGGGCATCATTCTTCTCATTTAATCAGTTATTTTGAGGGGTCAATGCGGTTGAGGATGGCTACAATCCAGCAACGTGGATGTTGGAAGTCACAACTTCAGCAAAAGAAATGGAATTGGGGATTGATTTTGCTGAAGTGTACAAAAATTCAGAGTTATACAGGAAAAACAAGGAAACTATCACAGAATTGTGTACTCCAGCCACTGGTTCAAAGGACCTTCATTTTCCTAGAAAGTACTCAAGGTCCTTCATTACTCAATACATGGCTTGCTTATGGAAACAACATTTGTCTTACTGGCGCAATAATCAATATACTGCCCAAAGGTTTCTCTTCACGATTGTTTTGGCCTTGTTGTTTGGGAGCATTTATTGGGACCTTGGCTCCAAAATTAAAAAGCCACAAGATCTTTTCAATGCCATGGGATCCATGTATGTTGCTGTTCTCCTTCTTGGTATTAAGAATGCTTATTCAGCACAACCGTTGGTGGCTGTTGAAAGAACAGTGTTTTACAGGGAAAAAGCTGCTGGAATGTATTCAGCTTTGGCATATGCTTTTGCTCAGGCAAACACTTGCTGGTCTAACTATTCTGATCTTAATATTTCCTTGCAGGTTGTGA 3822 0.4168 MEEDGSVKAGSSLRAGSTMSSLRIGSVSVWRNSGVEIFANSFHQEDDEEALKWAAIQKLPTMARLRTGLLTSPEGVANEIDVHQLGLQERRGLLERLVRVVEEDNEKFMLKLRDRIDRVGIAIPTIEVRFEHMSVGAEVHVGSRALPTFTNYMVNKVEGVLNFLHLLPSRKQHINILQDVSGIIRPARMTLLLGPPSSGKTTLLLALAGRLDSKLKFNGKVTYNGHEMNEFVPQRTAAYVSQNDLHIGEMTVRETMAFSARVQGVGPSYDLLREVSRREKEANITPDHDIDVYMKAVATEGQKANFITDYILRILGLEVCADTVVGNEMLRGISGGQRKRVTTGEILVGRPKALFMDEISTGLDSSTTFQVVNSLKHYIHSLKGTAVVSLLQPAPETYNLFDDIILLSDGQIVYEGPREHVLEFFASVGFKCPERKGVADFLQEVTSRKDQEQYWVLRDQPYRFVTTKEFVEAFQSFHVGRSLDNELETQFDKSKSHPAALATQKYGLGKWELFKACLSREFLLMKRNSFLHIFQLFQLATVGFIAMTVLFRTEIHRDSVTDGGIYVGALFYGLLVIFLDGFADLTVTVSKLPVFYKQRDFLFFPSWIYVLPGWILKLPMTFALVGIWVFLTYYVIGFDPYVGRLFRQFLLLLFVNQMASSLFRFIGALGRELTVGFTIGSFSLSILIAMSGFVLSKDNVKKWWLWGFWSSPMMYGQNALVNNEFLGKRWRHVLPNSTTPLGVEVLKSRGFFTQSKWYWIGVGALIGYTIVFNIAYILALTYLNPLVQHQAVKSEQSQSNAQDGGSISTRSSSRRKETERRGMVLPFESHSITFEDVTYSVDMPLEMKNQGVVEDRLDLLKGVSGTFRPGVLTALMGSTGAGKTTLMDVLAGRKTGGYIGGNITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSAEINSETRKMFIEEVIELVELNPLKHSIVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVIRAVRNIVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGHHSSHLISYFEGSMRLRMATIQQRGCWKSQLQQKKWNWGLILLKCTKIQSYTGKTRKLSQNCVLQPLVQRTFIFLESTQGPSLLNTWLAYGNNICLTGAIINILPKGFSSRLFWPCCLGAFIGTLAPKLKSHKIFSMPWDPCMLLFSFLVLRMLIQHNRWWLLKEQCFTGKKLLECIQLWHMLLLRQTLAGLTILILIFPCRL* 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02394 1273 CDD ABCG_PDR_domain1 166 416 IPR034001 -
Phac1g02394 1273 Pfam ABC transporter 860 1012 IPR003439 GO:0005524
Phac1g02394 1273 Pfam ABC-2 type transporter 513 725 IPR013525 GO:0016020|GO:0140359
Phac1g02394 1273 Pfam ABC-transporter N-terminal 102 151 IPR029481 -
Phac1g02394 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 433 IPR027417 -
Phac1g02394 1273 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 161 434 IPR003439 GO:0005524
Phac1g02394 1273 Gene3D - 832 1075 IPR027417 -
Phac1g02394 1273 Pfam ABC-2 type transporter 392 484 IPR043926 GO:0140359
Phac1g02394 1273 Pfam Plant PDR ABC transporter associated 730 792 IPR013581 -
Phac1g02394 1273 FunFam ABC transporter G family member 34 164 468 - -
Phac1g02394 1273 SMART AAA_5 869 1061 IPR003593 GO:0016887
Phac1g02394 1273 SMART AAA_5 186 418 IPR003593 GO:0016887
Phac1g02394 1273 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 832 1084 IPR003439 GO:0005524
Phac1g02394 1273 Pfam ABC transporter 177 359 IPR003439 GO:0005524
Phac1g02394 1273 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 14 1082 - -
Phac1g02394 1273 MobiDBLite consensus disorder prediction 794 822 - -
Phac1g02394 1273 FunFam ABC transporter G family member 40 846 1076 - -
Phac1g02394 1273 MobiDBLite consensus disorder prediction 794 809 - -
Phac1g02394 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 845 1069 IPR027417 -
Phac1g02394 1273 Gene3D - 165 469 IPR027417 -
Phac1g02394 1273 CDD ABCG_PDR_domain2 830 1067 IPR034003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02394 Phac-Chr1 33678957 33687476 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02394 K08711 - gmx:100813417 1902.49