Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02364 ATGGCAGATAGTGAATCCGTTGTTACTGAAGCATCTGCTCATTCCGCTGCTGAGACATATGCTTCGGCTGGTTATGCCGAGTCTGGGTCAAATCCTGCTCTTGAGGCAGGTACTACTGTTGATCAACCTGCTGGAGAAGGTGTTCAGTCCACTTCAACCTATGAATATGGTTATTCTAATACTGGTGATGTGAATGCGTATACTGGGGATCCGAATTCTGTTCTACAACAAGCCCAATTCAATGCAACTGGAGATACCAAGCCAGCCGGTGGACTGCCTGATGCTAATGAGGCCTCTGCTGCGGTTGGAAGCACTGCTGCTGAACCTGCTCTGGTTTCTGACTACAGTTCATCTGTCAATGGTGGTGTAGTCGGTGCAGTGGCAAATTCTGCCGGACTGGAAAACGGAAATGCGTTGGAAAACGTTGACGGGTCAGCTGATGAAAAACAACTCGCAGATGGCTACGCTGCCTTGTCTGCTGAGGAAGATCGACTATGGAATATTGTACGTGCTAATTCTTTAGATTTCAGTGCCTGGACTTCCTTGATTGAAGAGACCGAGAAGGTAGCCGAGGACAATATTCTGAAGATTCGAAGAGTTTATGATTCCTTTCTAGCAGAATTTCCCTTGTGCTATGGTTATTGGAAGAAATATGCCGACCATGAGGCACGACTTGGCTCTATAGATAAAGTTGTTGAAGTGTATGAGCGTGCTGTTCAAGGGGTTACATATTCAGTGGACATGTGGTTGCATTATTGCATATTTGCTATAAGCACGTATGGGGATCCAGACACAGTTCGTAGGCTTTTTGAACGAGGATTAGCGTATGTCGGAACAGATTATCTTTCTTTTCCCCTCTGGGATAAATACATTGAATATGAGTACATGCAGCAAGACTGGGCACGACTTGCCATAATTTACACCAGAATATTAGAGAATCCAAATCAACAATTAGATCGGTATTTCAGCAGCTTCAAAGAGTTAGCTGGAAACCGACCTTTGTCAGAGTTACGAACTGCTGAAGAAGCTGCTGTTAGTGTTGCTTCTGAGGCTGCTGGACAAGGTACTGAGGGAGAGGTTCATCCTGATGGTGCAGAGAATTCTCCTAAATCTGTAAGTGCTGGCTTAACAGAAGCAGAAGAGTTGGAGAAGTATATCGCCATTAGAGAAGAGATCTATAAAAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCCGGAGGCCCTATTTTCATGTACGGCCTCTCAATGTTGGAGAGCTTGAAAATTGGCACAACTATCTGGATTTTTTAGAAAGGGAAGGGGACTTAAGCAAGATTGTCAAGTTGTATGAGAGGTGTGTCATTGCATGTGCCAATTATCCTGAGTATTGGATACGCTATGTTTTGTGCATGGAAGCCAGTAGAAGCATGGATCTTGCAAATAATGTTCTTGCCCGAGCCACCCAAGTCTTTGTTAAGAGACAACCTGAGATACATATTTTCTGTGCCCGGTTTAAGGAGCAGAATGGAGATATAGATGGTGCTAGAGCTGCGTATCAACTTGTTCATACTGAAACTTCCCCTGGTCTTCTTGAAGCAATAATCAGGCATGCCAATATGGAACACCGATTGGGAAAAATGGAGGATGCGTTCTCCTTGTATGAACAGGCTATTGCTATCGAGAAAGGGAAAGAACATTCACAAACATTGCCGATGTTGTTTGCTCAGTATTCTCGATTTGTATATTTGGCTTCTGGGAATGCAGAGAAGGCTAGACAAATTTTAGTTGAGGGGCTAGAGAATGTTTTGTTGTCTAAACCACTACTTGAGGCTTTATTGCATTTTGAGGCTATTCAACCCTTGCCAAAGCGAGTAGATATTGACTTTCTGGAGTCATGGGTTTGCAAATTCATAATGCCTAACTCTGAGAGTCCTGGTGTAGCAAGTGCAATTGAGCGTGAGGAACTTTCTAGTATTTATCTGGAGTTTTTAAATCTCTTTGGAGACGTCCAATCGATCAAGAGGGCCGAGGATAGGCATGCGAAATTGTTTTTGCCACACAGAAGCATGACAGAGTTGAAAAAACGTCATGCTGAGGATTTCTTAACTTCAGACAAAGTAAAAGTGTCAAGAACGTATTCTGTTCAATCACCTGCCCAATCTGTGATTGGTGCGTATCCAAATGCACAGAACCAATGGACTAATTATGGAGTACAACCTCAAACTTGGCCTCCGGTTACACAAGCACAAGGGCAACAATGGACTGCTGGCTACACCCAGCAGGCTTCTTATGGGGCTTACGCTGGATATGGCGGCAATTATGCAAATTCTCAATTGCCTGCATCAGTTCCACCAAGTACTGCATACGGAGCTTATCCTCCTTCATATCCTGCACAGCCGGCGGTTCCTCAACAAAACTATGCGCAACCTGTTGCAGCCCCTGCACAGCAACCTGCTGCAGTTCCTCAAGCCTATTACGGGAGTTATTACTGA 2487 0.4415 MADSESVVTEASAHSAAETYASAGYAESGSNPALEAGTTVDQPAGEGVQSTSTYEYGYSNTGDVNAYTGDPNSVLQQAQFNATGDTKPAGGLPDANEASAAVGSTAAEPALVSDYSSSVNGGVVGAVANSAGLENGNALENVDGSADEKQLADGYAALSAEEDRLWNIVRANSLDFSAWTSLIEETEKVAEDNILKIRRVYDSFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARLAIIYTRILENPNQQLDRYFSSFKELAGNRPLSELRTAEEAAVSVASEAAGQGTEGEVHPDGAENSPKSVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVGELENWHNYLDFLEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASRSMDLANNVLARATQVFVKRQPEIHIFCARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIRHANMEHRLGKMEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILVEGLENVLLSKPLLEALLHFEAIQPLPKRVDIDFLESWVCKFIMPNSESPGVASAIEREELSSIYLEFLNLFGDVQSIKRAEDRHAKLFLPHRSMTELKKRHAEDFLTSDKVKVSRTYSVQSPAQSVIGAYPNAQNQWTNYGVQPQTWPPVTQAQGQQWTAGYTQQASYGAYAGYGGNYANSQLPASVPPSTAYGAYPPSYPAQPAVPQQNYAQPVAAPAQQPAAVPQAYYGSYY* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02364 828 SMART hat_new_1 439 471 IPR003107 GO:0006396
Phac1g02364 828 SMART hat_new_1 298 331 IPR003107 GO:0006396
Phac1g02364 828 SMART hat_new_1 192 224 IPR003107 GO:0006396
Phac1g02364 828 SMART hat_new_1 226 258 IPR003107 GO:0006396
Phac1g02364 828 SMART hat_new_1 543 578 IPR003107 GO:0006396
Phac1g02364 828 SMART hat_new_1 261 296 IPR003107 GO:0006396
Phac1g02364 828 SMART hat_new_1 584 616 IPR003107 GO:0006396
Phac1g02364 828 MobiDBLite consensus disorder prediction 32 56 - -
Phac1g02364 828 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 418 710 - -
Phac1g02364 828 Gene3D Tetratricopeptide repeat domain 167 334 IPR011990 GO:0005515
Phac1g02364 828 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 146 817 - -
Phac1g02364 828 Gene3D Tetratricopeptide repeat domain 419 718 IPR011990 GO:0005515
Phac1g02364 828 MobiDBLite consensus disorder prediction 351 373 - -
Phac1g02364 828 FunFam Putative pre-mrna-processing factor 39 167 337 - -
Phac1g02364 828 SUPERFAMILY TPR-like 169 685 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02364 Phac-Chr1 33365659 33376295 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02364 K13217 - gmx:100787373 1422.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02364 1 33365659 33376295 Phac1g02364 1 33365659 33376295 ECH