Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac1g02310 | ATGGGTTCTCTTCCTGCGCACGCATTCCCAACGACGGTGGGCAAAGATTGCCTTGACGAGAGCAGCCACATTGACGAGAGCGCCCTGACCAAGCTGTTCAAGTCGCAGCAGAGCCACCTCAACTTCTTCTTCGACCACATCGACTACTCTCAAACCCTGGCCTTCACGCGCGCCCTCCTTAACGCGTCCGGCACCGTCTTCTTCACCGGCGTCGGCAAGTCCGGCTTCGTTGCGCACAAGATCTCGCAGACGCTCGTCTCGCTCGGCATCCGCTCGGCCTTCCTGTCGCCGGTGGACGCGCTCCACGGCGACATCGGGATCCTCACTGACCGCGACGTGCTCGTCCTCCTCAGCAAGTCAGGCGCCACGGAGGAGCTCCTCCGCCTAGTGCCGTGCGCGAGGGCGAAGGGTGCACTCCTCATCGCCCTCACCTCCGTCGAAGGAAACGCGCTGGCCGCGGTGTGCGACATGACAGTGCATTTGCCTCTCCAGAGAGAGCTCTGTCCGTTCAACCTTGCGCCGGTCACATCCACCGCCATTCAGATGGTTTTTGGGGACACCGTGGCCATCGCGCTCATGGAGGCGAGGAATCTCACCAAGGAGGAGTACGCCGCGAACCATCCCGCCGGCAAGATCGGGAAGAGTCTCATCTTCAAGGTGAAGGATGTGATGAAGAAACAGGAAGACGTTCCGATATGCAGAGAATCGGATTTGATTATGGATCAGCTTGTGGAACTGACGAGTAAAGGATGCGGATGCCTCCTTGTTATCGATGACTGTTACCGTCTGATCGGAACGTTCACCGACGGTGATCTCCGTCGCACTCTCCGAGCCAGTGGAGAAGCCATTTTCAAACTCACTGTGGGGAAGATGTGCAATAGGAATCCAAGAATTATTGGTCCGGAGGCTATGGCGGTGGAGGCGATGAAGAAGATGGAGGCACCTCCATCGCCTGTTCAGTTTTTGCCTGTGATAAACGATGAGAATATTTTGATTGGGATTGTGACCTTGCACGGATTGGTTTCAGCTGGCTTGTGA | 1038 | 0.5703 | MGSLPAHAFPTTVGKDCLDESSHIDESALTKLFKSQQSHLNFFFDHIDYSQTLAFTRALLNASGTVFFTGVGKSGFVAHKISQTLVSLGIRSAFLSPVDALHGDIGILTDRDVLVLLSKSGATEELLRLVPCARAKGALLIALTSVEGNALAAVCDMTVHLPLQRELCPFNLAPVTSTAIQMVFGDTVAIALMEARNLTKEEYAANHPAGKIGKSLIFKVKDVMKKQEDVPICRESDLIMDQLVELTSKGCGCLLVIDDCYRLIGTFTDGDLRRTLRASGEAIFKLTVGKMCNRNPRIIGPEAMAVEAMKKMEAPPSPVQFLPVINDENILIGIVTLHGLVSAGL* | 346 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac1g02310 | 345 | Gene3D | - | 24 | 214 | - | - | |
| Phac1g02310 | 345 | Pfam | CBS domain | 220 | 276 | IPR000644 | - | |
| Phac1g02310 | 345 | Pfam | CBS domain | 288 | 343 | IPR000644 | - | |
| Phac1g02310 | 345 | PIRSF | KdsD_KpsF | 15 | 345 | IPR004800 | GO:0005975|GO:0016853 | |
| Phac1g02310 | 345 | ProSiteProfiles | CBS domain profile. | 224 | 283 | IPR000644 | - | |
| Phac1g02310 | 345 | SUPERFAMILY | SIS domain | 31 | 344 | IPR046348 | GO:0097367|GO:1901135 | |
| Phac1g02310 | 345 | CDD | CBS_pair_SIS_assoc | 216 | 341 | - | - | |
| Phac1g02310 | 345 | PANTHER | - | 19 | 345 | - | - | |
| Phac1g02310 | 345 | NCBIfam | KpsF/GutQ family sugar-phosphate isomerase | 64 | 335 | IPR004800 | GO:0005975|GO:0016853 | |
| Phac1g02310 | 345 | ProSiteProfiles | CBS domain profile. | 292 | 345 | IPR000644 | - | |
| Phac1g02310 | 345 | Pfam | SIS domain | 60 | 190 | IPR001347 | GO:0097367|GO:1901135 | |
| Phac1g02310 | 345 | Gene3D | - | 215 | 343 | IPR046342 | - | |
| Phac1g02310 | 345 | ProSiteProfiles | SIS domain profile. | 55 | 198 | IPR001347 | GO:0097367|GO:1901135 | |
| Phac1g02310 | 345 | CDD | SIS_Kpsf | 64 | 191 | IPR035474 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phac1g02310 | Phac-Chr1 | 32880519 | 32884322 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac1g02310 | K06041 | - | gmx:100805755 | 613.224 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phac1g02310 | 1 | 32880519 | 32884322 | Phac1g02310 | 1 | 32880519 | 32884322 | ECH |