Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02275 ATGCATATAAATAAGAAGAAAAAGGAGGGAAGAGAGGGAGTGTGGAGTGAGAGTGAGAGAATGTCGAACCCTCAAAATCAGAAACCATGGAAGGCGGAATACGCGAAGTCGGGGCGATCGTCATGCAGGACGTGCAAGAGCCCCATTGCCACCGAAGCGCTGCGTCTCGGCAAGATGGTCAAATCCTTCAAGTTCGATGGCCTCATGCCCATGTGGAATCATGCTGCTTGCATCTTGGAGAAAGCTAATCAGATAAAATTAGTTGACGATGTTGAAAACTTAGAGTCGCTTCGTTGGGAAGATCAGCAGAAAATCAGAAAATACATAGAGAGTGGCGGCAGCAGCAGCACTGCCACAAAATCAGGCTCAAAAGCTGTCAATGATACTGAATGTGGTATTGAAGTTTCGCAGACTTCTCGTGCTACTTGTAGGGATTGCAGTCAAAAAATTATCAAAGGAGAGGTTCGTATATCTACTAAGCCTGATGGTCCAGGCGCAAGAGGTTTGGCTTGGCACCATGCCAAGTGTCTCATGGAATTGTCGCCATCAATTCAAGTGGATAAGTTATCTGGATGGAATAGTCTTTCATCTTCTGATCAATCAGCTGTCAGTGACTTGGCTAACAAGGGTCATCCGATGAACAAGGGGGGTGTTAGTGGTACAAACATTGAGACTGAAAAGGGTAAAGAATCCACACAACTACACACTTCCAGAGGTGGTATAAAACGAGGGAAAGATGCCGATAGTGAGCGAAAATCAAAAGTTGCTAAGGCCAAGGGAGATGTGTCCGCAAGCAGTGCATTGTCAGTGAAAAATTATAATGAAACCGGGGAAGCATGTGATCTGGAGAAGAAAATGGAAATCCAGAGCAAAGAAATCTGGGCTCTGAAGGATGATCTAAAAAAGAATGTGACAACACCAGAGTTGCGCGAAATGCTGGAAGCCAATGATCAAGATTCAACAGGATCAGAACTTGATTTACGTGACCGCTGTGCTGATGGAATGATGTTTGGAGCACTTGGTCTTTGCCCAATATGTTCTGGATTTCTACGTCACTCTGGAGGAATGTACCGTTGCAATGGATACATTTCCGAGTGGAGTAAATGTTCTTACTCTACCTGCGAATCAAAACGTGTTGAAGGGAAGTGGAAAATCCCAGAAGAAACAAATAATCAATACCTTAAAAAGTGGTTCAAATCTCAAAAAGGGAAGAAACCAGTTAGGATATTGCCTCTTCCATCACCAAGAAAGTCTGCTGAAAGTCAAATTACTGCTAGTCAGCATCAATCATCACACTCTGAAAATTTCCGAGATATCAAAGTTGCTATCTGTGGATTAGCTAATGACACTATTAAGGAATGGAAAAGCAAAATTAGTGCCATGGGTGGAATGTTTCATGCAAAAGTAAAGAAAGATACTAACTGCTTGGTGGTTGGTGGAGTGCTCAATGATGAAGCTGAGATGGGGAAGGCAAGGAGGATGAAAATACCAATAGTCAGAGAGGACTACTTGATTGACTGCATACAAAGAAAGAAGAGACTTCCATTTGATATGTACAAGGTTGAAATGATTGGTGAGGCTTCTAGCATGGTCACCATTAAAGTGAAGGGACAAAGTGCTGTTCATGAGGCTTCTGGCTTACAAGAGTCTGGCCACATACTTGTGGAAGGGAAAAGCATATATAACACAACTTTGAATATGTCTGATTTGTCTACTGGTATTAACAGTTACTACATTCTCCAGATAATCCAAGAAGATAAGGGGTCAGATTGCTCTGTGTTTCGTAAATGGGGTCGAGTAGGAAATGAAAAGATTGGAGGAAGTAAACTGGTGGATGGAATGTCAAAATCTGATGCAATCTGTGAATTCAAACGATTATTCTTTGCGAAGACTGGAAACACTTGGGAGGCATGGGAACAAAAGACTATTCAGAAGCAACCTGGAAGATTTTTCCCACTGGATATTGATTATGGTGTTAACAAACAGGTGTCAAAAAAGAAAAGAAATGACAATGACAGCAAACTACCCTTGCCATTAATAGAATTGATTAAGATGCTCTTCAATGTAGAAACTTACAGATCTGCCATGATGGAGTTTGAGATTAATATGTCTGAAATGCCACTTGGGAAACTAAGCAAAAGCAATATCCAAAAGGGGTTTGAAGCATTGACGGAGATACAGAATCTGTTAAAAACTACTAGTCCGGATCCATCAGTCAAGGAAAGCTTACTTATTAATGCCAGCAACCGGTTCTTCACCATGATCCCTTCTATTCATCCACATATTATTAGGGATGAGGATGATTTTAAGTCTAAGGTGAAAATGTTAGAAGCCCTTCAAGACATTGAAATAGCCTCTCGATTAGTTGGATTTGATGCCAACAACGAGGACTCAATTGACGATAGTTATAAGAAGCTTCACTGTGATATATCTCCACTTCCTCATGATAGTGAAGATTTTTGTTTAATTGAAAAGTTTCTCCATAATACTCATGCCCCTACTCATACGGACTGGAGTCTTGAGCTGGAAGAAGTTTTTTCACTTGAAAGGGAAGGTGAATTTGATAAGTTTGCTCCTTACAGGGATAAACTTGGAAACAGAATGCTCCTATGGCATGGTTCTAGGTTGACAAACTTTGTGGGCATTCTTAGCCAAGGACTCAGAATTGCACCTCCTGAAGCCCCCGCGACTGGCTATATGTTTGGCAAAGGGGTGTACTTTGCTGACCTGGTCAGCAAAAGTGCCCAGTATTGCTTCACTGATAAGAAAAATCCTATTGGTCTAATGCTTTTGAGTGAAGTTGCACTCGGAAACATCTATGAGCTCAAGAAAGCTAAGTATATGGATAAACCTCCCGAAGGAAAGCACTCTACTAAAGGACTGGGCAAGAAAATGCCTCAAGAATCGGAATGTGCAAAGTGGAGAGGCAATGTGACTGTTCCTTGTGGCAAACCAGTGCCATCAAATGTCAAGGCTTCTGAGCTCATGTACAATGAGTACATTGTTTATAATACTGCCCAAGTTAAGATGCAATTCTTGTTGAAGGTGAGGTTTCATCACAAGAGATGA 3069 0.4158 MHINKKKKEGREGVWSESERMSNPQNQKPWKAEYAKSGRSSCRTCKSPIATEALRLGKMVKSFKFDGLMPMWNHAACILEKANQIKLVDDVENLESLRWEDQQKIRKYIESGGSSSTATKSGSKAVNDTECGIEVSQTSRATCRDCSQKIIKGEVRISTKPDGPGARGLAWHHAKCLMELSPSIQVDKLSGWNSLSSSDQSAVSDLANKGHPMNKGGVSGTNIETEKGKESTQLHTSRGGIKRGKDADSERKSKVAKAKGDVSASSALSVKNYNETGEACDLEKKMEIQSKEIWALKDDLKKNVTTPELREMLEANDQDSTGSELDLRDRCADGMMFGALGLCPICSGFLRHSGGMYRCNGYISEWSKCSYSTCESKRVEGKWKIPEETNNQYLKKWFKSQKGKKPVRILPLPSPRKSAESQITASQHQSSHSENFRDIKVAICGLANDTIKEWKSKISAMGGMFHAKVKKDTNCLVVGGVLNDEAEMGKARRMKIPIVREDYLIDCIQRKKRLPFDMYKVEMIGEASSMVTIKVKGQSAVHEASGLQESGHILVEGKSIYNTTLNMSDLSTGINSYYILQIIQEDKGSDCSVFRKWGRVGNEKIGGSKLVDGMSKSDAICEFKRLFFAKTGNTWEAWEQKTIQKQPGRFFPLDIDYGVNKQVSKKKRNDNDSKLPLPLIELIKMLFNVETYRSAMMEFEINMSEMPLGKLSKSNIQKGFEALTEIQNLLKTTSPDPSVKESLLINASNRFFTMIPSIHPHIIRDEDDFKSKVKMLEALQDIEIASRLVGFDANNEDSIDDSYKKLHCDISPLPHDSEDFCLIEKFLHNTHAPTHTDWSLELEEVFSLEREGEFDKFAPYRDKLGNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCFTDKKNPIGLMLLSEVALGNIYELKKAKYMDKPPEGKHSTKGLGKKMPQESECAKWRGNVTVPCGKPVPSNVKASELMYNEYIVYNTAQVKMQFLLKVRFHHKR* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02275 1022 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 673 807 IPR036616 GO:0003950
Phac1g02275 1022 Gene3D - 339 399 IPR038650 -
Phac1g02275 1022 Gene3D - 21 127 IPR036957 GO:0003677|GO:0008270
Phac1g02275 1022 FunFam Poly [ADP-ribose] polymerase 339 400 - -
Phac1g02275 1022 FunFam Poly [ADP-ribose] polymerase 125 238 - -
Phac1g02275 1022 PIRSF NAD_ADPRT 23 1022 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Phac1g02275 1022 Gene3D - 807 1022 - -
Phac1g02275 1022 FunFam Poly [ADP-ribose] polymerase 24 124 - -
Phac1g02275 1022 Pfam WGR domain 561 640 IPR008893 -
Phac1g02275 1022 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 131 217 - -
Phac1g02275 1022 PANTHER DNA LIGASE 130 1020 - -
Phac1g02275 1022 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 27 120 - -
Phac1g02275 1022 Pfam BRCA1 C Terminus (BRCT) domain 433 508 IPR001357 -
Phac1g02275 1022 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 33 109 IPR001510 GO:0003677|GO:0008270
Phac1g02275 1022 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 134 205 IPR001510 GO:0003677|GO:0008270
Phac1g02275 1022 ProSiteProfiles WGR domain profile. 550 650 IPR008893 -
Phac1g02275 1022 MobiDBLite consensus disorder prediction 1 33 - -
Phac1g02275 1022 Gene3D - 266 338 - -
Phac1g02275 1022 MobiDBLite consensus disorder prediction 409 432 - -
Phac1g02275 1022 ProSiteProfiles PARP catalytic domain profile. 797 1022 IPR012317 GO:0003950
Phac1g02275 1022 CDD parp_like 673 1017 - -
Phac1g02275 1022 SMART PADR1_2 327 380 IPR012982 GO:0008270
Phac1g02275 1022 SUPERFAMILY BRCT domain 433 521 IPR036420 -
Phac1g02275 1022 Pfam Poly(ADP-ribose) polymerase, regulatory domain 673 803 IPR004102 GO:0003950
Phac1g02275 1022 MobiDBLite consensus disorder prediction 417 432 - -
Phac1g02275 1022 ProSiteProfiles BRCT domain profile. 431 521 IPR001357 -
Phac1g02275 1022 SMART zf_PARP_3 134 208 IPR001510 GO:0003677|GO:0008270
Phac1g02275 1022 SMART zf_PARP_3 33 110 IPR001510 GO:0003677|GO:0008270
Phac1g02275 1022 MobiDBLite consensus disorder prediction 202 260 - -
Phac1g02275 1022 FunFam Poly [ADP-ribose] polymerase 266 338 - -
Phac1g02275 1022 Gene3D - 662 806 IPR036616 GO:0003950
Phac1g02275 1022 SUPERFAMILY WGR domain-like 529 655 IPR036930 -
Phac1g02275 1022 SMART WGR_cls 561 645 IPR008893 -
Phac1g02275 1022 ProSiteProfiles Zinc finger poly(ADP-ribose) polymerase (PARP)-type profile. 30 113 IPR001510 GO:0003677|GO:0008270
Phac1g02275 1022 FunFam Poly [ADP-ribose] polymerase 665 806 - -
Phac1g02275 1022 SUPERFAMILY ADP-ribosylation 806 1021 - -
Phac1g02275 1022 ProSiteProfiles Zinc finger poly(ADP-ribose) polymerase (PARP)-type profile. 131 211 IPR001510 GO:0003677|GO:0008270
Phac1g02275 1022 Pfam PADR1 (NUC008) domain 329 378 IPR012982 GO:0008270
Phac1g02275 1022 Pfam Poly(ADP-ribose) polymerase catalytic domain 817 1018 IPR012317 GO:0003950
Phac1g02275 1022 Gene3D BRCT domain 426 528 IPR036420 -
Phac1g02275 1022 MobiDBLite consensus disorder prediction 1 16 - -
Phac1g02275 1022 Gene3D - 128 215 IPR036957 GO:0003677|GO:0008270
Phac1g02275 1022 CDD WGR_PARP1_like 551 657 - -
Phac1g02275 1022 ProSiteProfiles PARP alpha-helical domain profile. 672 790 IPR004102 GO:0003950
Phac1g02275 1022 SMART BRCT_7 433 511 IPR001357 -
Phac1g02275 1022 MobiDBLite consensus disorder prediction 239 258 - -
Phac1g02275 1022 ProSiteProfiles Generated from MSF file: '/work/www/psmaker/tmp/pfmake.input.483415'. 273 412 IPR047572 GO:0008270
Phac1g02275 1022 FunFam Poly [ADP-ribose] polymerase 807 1022 - -
Phac1g02275 1022 FunFam Poly [ADP-ribose] polymerase 429 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02275 Phac-Chr1 32473965 32484383 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02275 K24070 - gmx:100800968 1770.75