Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02187 ATGTCGTCGTTAATAGCAGATTTGCTCCGTCAAAGTGGCGGCACTGCCGTCATCGACGGCGGTCTTGCGACGGAGCTGGAGCGCCATGGTGCGGACCTCAACGATCCCTTATGGAGCGCTAAGTGCCTCTTTTCCTCTCCACACCTCATTCGCCAGGTGCACCTTGATTACCTGGAAAATGGCGCTGACATTATAATCACAGCATCTTATCAAGCCACTATTCAAGGTTTTAAAGCCAAAGGCTATACTGATGAAGAGAGTGAAGTTATGCTCAGAAGGAGTGTTGAAATTGCTCGCGAGGCGCGTGAATTGTACTATAAAGAATGCTCTTCGGGTGATGGGGCTGATGGTAAAATCCTCAAACAACGGCCTATCCTGATTGCTGCGTCAGTGGGGAGCTATGGAGCTTATTTAGCCGACGGATCAGAGTATAGTGGTGATTATGGTGATGCTATCACGAAGACAACTCTAAAAGATTTTCATCGGAAAAGAGTTCAAATTTTAGCAGATTCAGGTGCTGACCTGCTTGCATTCGAAACAGTGCCCAATAAGCTTGAAGCTGAGGCTTATGCTCAGCTTCTGGAAGAAGAAAACATACAAATTCCAGCATGGTTTGCTTTCAACTCAAAGGATGGAGTTAGTGTTGTTAGCGGTGATTCTCTAATGGAATGTGGCTCTATTGCTGAATCATGCAAAAAAGTTGTTGCTGTTGGAATTAACTGTACCCCGCCTAGATTTATAGATGATCTGATTGTTTTGCTCAAGAAGGTGACAACAAAACCAATTGTAATATATCCAAACAGTGGGGAAACTTATGATGCTGAACTAAAGGAGTGGGTGCAAAATACTGGTGTAACAGATGAAAATTTTATCTCATATGTTACTAAATGGCGTGAGCTAGGGGCCTCCCTTGTAGGTGGCTGTTGCAGAACGACTCCAGCTACTATAAGGAAGATATACAGTGTACTGTCTAGCAGGGAATCTGCTATTCTTGGCAAAGAGTGA 1005 0.4438 MSSLIADLLRQSGGTAVIDGGLATELERHGADLNDPLWSAKCLFSSPHLIRQVHLDYLENGADIIITASYQATIQGFKAKGYTDEESEVMLRRSVEIAREARELYYKECSSGDGADGKILKQRPILIAASVGSYGAYLADGSEYSGDYGDAITKTTLKDFHRKRVQILADSGADLLAFETVPNKLEAEAYAQLLEEENIQIPAWFAFNSKDGVSVVSGDSLMECGSIAESCKKVVAVGINCTPPRFIDDLIVLLKKVTTKPIVIYPNSGETYDAELKEWVQNTGVTDENFISYVTKWRELGASLVGGCCRTTPATIRKIYSVLSSRESAILGKE* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02187 334 ProSiteProfiles Homocysteine-binding domain profile. 4 323 IPR003726 -
Phac1g02187 334 FunFam Homocysteine S-methyltransferase 5 322 - -
Phac1g02187 334 Pfam Homocysteine S-methyltransferase 17 321 IPR003726 -
Phac1g02187 334 PANTHER ZGC:172121 9 327 - -
Phac1g02187 334 PIRSF BHMT 268 332 IPR017226 GO:0008168|GO:0008270|GO:0009086
Phac1g02187 334 PIRSF BHMT 5 197 IPR017226 GO:0008168|GO:0008270|GO:0009086
Phac1g02187 334 SUPERFAMILY Homocysteine S-methyltransferase 12 326 IPR036589 -
Phac1g02187 334 Gene3D - 5 321 IPR036589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02187 Phac-Chr1 31593888 31599329 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02187 K00547 - gmx:100790567 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02187 1 31593888 31599329 Phac1g02187 1 31593888 31599329 ECH