Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02108 ATGGAAGCAACGCGTTTCTCCCGTAATCACTTCCACCCACACTCCTTCCAAACGAAACACAACGCTTCCAGAGAAAGAAGATACGTAAAATGCATCAACGGAATTGGTACTAGGGTTTCGATTTTCACAATCCCCGCATTCAGCACAAGGATTTCTCCTTCGCGGAACCTGGCTCTTTCTGTTAACTTCTCCGACCGGCTCCGGAGTGATTATGCACGCGTCGAGGCTCCGAAGAATGAGCTTCCGAACGAGGAGGTTGTTCCCGGGACTCACGGAGGGGAAGCGGCAGTTGCGTTGTCTCCGGGGGCTGATAACTCGGTGACCCTGCAATTGAAACCTGTAATGTTCAGAAACAGGTTTCTAGACTTTGTGCGGTTGGGTTCCGTGATAAACGGTGCGGCTGAATCGTTTTTCAAGAGCGAGATTAGGAGGAGGTTGTTCGTGACGGCGGTGCTGATTGTGATTAGTCGCGTTGGTTATTTTATTCCTCTTCCTGGGTTTGACAGAAGGTTGATACCGGAAGACTACTTGAGCTTTGTGTCAGGATCATCTGTTGATGAACTTGGTGACTTCTCTGCTGAGCTCAAACTATCTATTTTCCAGCTTGGTATTAGTCCTCAGATAATAGCGTCCATTATTATGCAGGTACTCTGTCATGTTGTCCCCTCCCTAGTAAAGCTACGAAAAGAAGGTCTGGATGGGCAGGAAAAGATTAAGAGTTATATATGGTGGATGTCATTCGGCTTTGCAATTTTGGAAGCTTTAATAGTTTCTTGCTACTCACTTCCATATTCAATTTATGCTGCCAGTTATAGGGTCAAACATGTAATGGTGACATCAGTTTTATTGGTTTGTGGTGCAATGACTATTACATGGATATGTGATACTATATCAGAATCTGGATTTGGTCAAGGCTCGTCTCTAATCATATGTGTGGGAATACTTACGGGGTATATGGAGACATTATACAAAATGCTTACTCAGCTTTCAGTGAGTGCTGTGAGCTGGTGGCCATATGTGCTTGCAGTATTGGGTATCTTCACCGTTGTCACTATGTGGGCAGTTGTAGTAACAGAAGGTTGCAGGAAAGTAAAGCTGCAGTACTATGGTTTTAAACTTGCTTCTGCTGCAAGAGAGCAATCACCCATTACTGAAGTGGAGCCCTATATTCCTTTCAATATTAATCCAGCAGGGATGCAACCTATTCTTACCACCTCTTACCTCTTGGCACTTCCAAGTATTCTTTCAAGTCTGCTAAGGTCACCTTTTTGGGAGCATGTCAAGGAAATATTGAACCCTGAAACTTCTGTCGGTGCTGAGCCGTGGGTTTACTATTCCATATATGCTTTTTTTGTCTTCCTGTTCAATATTTTTGACATTGCTAACATGCCAAAGGAAATTGCGGATTATTTAAATAAGATGGGTGCGAGAATACCAAACATAAAGCCTGGGAAGGCTACCATAGAATACCTCACCAAGGTTCAGGCATCCACACGATTTTGGGGGGGGCTACTGTTAAGTGTTCTGGCCACTACATCAAGTGTTCTTGACCACTATCTGCGGCGTATCAATGCTGGGTTTGCTATTGGTTTTACATCAGTTCTAATCATTGTCGGTTCCATTATTGAACTCAGAAGATCATATCAAGCATATAATGTGATGCCAAGCTTAAGCAATGCCCTGAGACGATACGGTGTATAA 1701 0.4392 MEATRFSRNHFHPHSFQTKHNASRERRYVKCINGIGTRVSIFTIPAFSTRISPSRNLALSVNFSDRLRSDYARVEAPKNELPNEEVVPGTHGGEAAVALSPGADNSVTLQLKPVMFRNRFLDFVRLGSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPEDYLSFVSGSSVDELGDFSAELKLSIFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDGQEKIKSYIWWMSFGFAILEALIVSCYSLPYSIYAASYRVKHVMVTSVLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLYKMLTQLSVSAVSWWPYVLAVLGIFTVVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPILTTSYLLALPSILSSLLRSPFWEHVKEILNPETSVGAEPWVYYSIYAFFVFLFNIFDIANMPKEIADYLNKMGARIPNIKPGKATIEYLTKVQASTRFWGGLLLSVLATTSSVLDHYLRRINAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02108 566 SUPERFAMILY Preprotein translocase SecY subunit 128 551 IPR023201 -
Phac1g02108 566 Pfam SecY 198 544 IPR002208 GO:0015031|GO:0016020
Phac1g02108 566 MobiDBLite consensus disorder prediction 1 22 - -
Phac1g02108 566 FunFam Preprotein translocase subunit SCY2, chloroplastic 130 556 - -
Phac1g02108 566 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 136 554 IPR002208 GO:0015031|GO:0016020
Phac1g02108 566 Gene3D SecY subunit domain 130 556 IPR023201 -
Phac1g02108 566 PRINTS Preprotein translocase SecY subunit signature 197 217 - -
Phac1g02108 566 PRINTS Preprotein translocase SecY subunit signature 238 261 - -
Phac1g02108 566 PRINTS Preprotein translocase SecY subunit signature 299 322 - -
Phac1g02108 566 PRINTS Preprotein translocase SecY subunit signature 397 416 - -
Phac1g02108 566 PRINTS Preprotein translocase SecY subunit signature 146 164 - -
Phac1g02108 566 PRINTS Preprotein translocase SecY subunit signature 442 464 - -
Phac1g02108 566 PRINTS Preprotein translocase SecY subunit signature 273 298 - -
Phac1g02108 566 PRINTS Preprotein translocase SecY subunit signature 530 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02108 Phac-Chr1 30980087 30987947 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02108 58 566 Miscellaneous Gene Families AT2G31530 76.667 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02108 - - gmx:100803256 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02108 1 30980087 30987947 Phac1g02108 1 30980087 30987947 ECH