Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02066 ATGGCGGCTGTCCCAGTATCGCGGACCGATCCACCGGCAATGGTGCCGCCGCCGCTCCTCGTTTCCGACTCCTTCGCCAAGGACGCCATTCTTGCCTGGTTTCGCGGCGAGTTCGCGGCAGCCAACGCCATCATCGACACACTCTGCGGGCACCTAGCGCACCTCGCTACAGCCTCCTCCGAATACGAAGCCACTTTCGCCGCCATCCACCGCCGCCGCATGAACTGGATCCCTGTCATCCAGATGCAGAAGTACCACTCCATCGCTGACATCGCTCTCGAGCTCCGCAGAGTCGCTGACAGGAAAACCGAGACAGAAGGCGCTAGGAAGAGCGAGAGTAGCTTGGACGACGAACAGAAATTGGAGAAGGAAACTTTGGAGACTGGTGGAAATGAAGCTGACGAAGCTGCGCCGGAGTATGATTCGCCAGACAGTGAAATAACTGATTCAGGATCTCAGGAAATGCAACCCAGTGCATTGAACAATAATATATGTTCCAATCATGAAGAATGTGAAGGACGCTCTTCACAGATAAAGCTGACAAAAGGTTTTTCAGCAAAGGAGTCAGTGAAGGGACATATGGTGAACGTTGTGAAAGGATTGAAGTTGTACGAGGATGTTTTTTCTGAATCAGAAATCTGCAAGCTGACTGATTTTGTGAATGATATCCATGCTGCTGGTCAGAACGGCGAACTCTCAGGGGAAACATTTATACTATTCAACAAACAGATGAAGGGAAACAAGAGAGAGCTGATTCAGTTGGGTGTTCCTATATTTGGACAGATAAAGGATGATACCAAAAACAATATAGAGCCGATTCCAACACTTGTCCATGATGTCATTGATCACCTTATTCAATGGAAATTGATTCCAGAGTACAAAAGGCCAAATGGTTGTATCATCAACTTTTTTGAAGAGGGAGAATTTTCTCAACCATTCCTGAAACCACCACATTTGGACCAGCCTCTATCCACACTTCTTCTCTCTGAATCAACAATGGCTTTTGGGCGCATCCTTGTCAGTGAGAATGATGGGAACTACAAGGGGCCACTCATGCTCTCATTGAAGGAGGGGTCTCTTATAGTGATGAGGGGAAACAGTGCAGACATGTCAAGGCACGTAATGTGTCCATCCCCTAACAGAAGGGTGAGCATCAGCTTCTTTAGAGTGAAGCCAGATTCCAATCAATGTCAATCACCAAATCCTACCATGACAGCTGCAATGACTCTTTGGCAACCTGGCATTACTAGCCCATATACTTTGCCAAATGGAGCTCTTAGTGGCTATGAGGTAATAGATATGATGCCTAACTGGGGAATATTTGGTGCTCCAATGGTTATGCTACCCCCAATGCGCCCTATGGCAGTGCACTCTCGCAAACTTCCGCGAGGTGGGACTGGGGTTTTCTTGCCTTGGAAGGGAGCATCCAGAAAACACGCAAGGCATCTGCCACCTCGTGCTCAAAAAGGACGACTTATGGAATTACCCTCCCCAGTTGAATCACACTTGGGAGAGTCTACCTCTGAACCCAGTATAGCTGTTGAAGGGTAG 1551 0.4829 MAAVPVSRTDPPAMVPPPLLVSDSFAKDAILAWFRGEFAAANAIIDTLCGHLAHLATASSEYEATFAAIHRRRMNWIPVIQMQKYHSIADIALELRRVADRKTETEGARKSESSLDDEQKLEKETLETGGNEADEAAPEYDSPDSEITDSGSQEMQPSALNNNICSNHEECEGRSSQIKLTKGFSAKESVKGHMVNVVKGLKLYEDVFSESEICKLTDFVNDIHAAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKDDTKNNIEPIPTLVHDVIDHLIQWKLIPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPLSTLLLSESTMAFGRILVSENDGNYKGPLMLSLKEGSLIVMRGNSADMSRHVMCPSPNRRVSISFFRVKPDSNQCQSPNPTMTAAMTLWQPGITSPYTLPNGALSGYEVIDMMPNWGIFGAPMVMLPPMRPMAVHSRKLPRGGTGVFLPWKGASRKHARHLPPRAQKGRLMELPSPVESHLGESTSEPSIAVEG* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02066 516 MobiDBLite consensus disorder prediction 476 516 - -
Phac1g02066 516 MobiDBLite consensus disorder prediction 102 130 - -
Phac1g02066 516 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 295 392 IPR005123 -
Phac1g02066 516 MobiDBLite consensus disorder prediction 102 166 - -
Phac1g02066 516 Gene3D - 184 399 IPR037151 -
Phac1g02066 516 SUPERFAMILY Clavaminate synthase-like 191 390 - -
Phac1g02066 516 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 26 125 IPR044842 GO:0003729|GO:0006402|GO:0032451
Phac1g02066 516 MobiDBLite consensus disorder prediction 145 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02066 Phac-Chr1 30655416 30661992 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02066 K10767 - gmx:100796344 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02066 1 30655416 30661992 Phac1g02066 1 30655416 30661992 ECH
Phac1g02066 1 30655416 30661992 Phac7g02641 7 30345048 30350789 PCT